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GenomicsRhodoferax sp. U2-2l
Rhodoferax sp. U2-2l Genome sequencing and assembly
PRJNA770872 | ENA
TranscriptomicsNuclear Matrix Factor hnRNP U/SAF-A Exerts a Global Control of Alternative Splicing by Regulating U2 snRNP Maturation
The nuclear matrix associated hnRNP U/SAF-A protein has been implicated in diverse pathways from transcriptional regulation to telomere length control to X inactivation, but the precise mechanism underlying each of these processes has remained elusive. Here, we report hnRNP U as a regulator of SM...
ORGANISM(S): Homo sapiens 
2012-02-16 | E-GEOD-34491 | biostudies-arrayexpress
TranscriptomicsSHAPE-Seq of human U2 snRNA and U4 pre-snRNA
Spliceosomal snRNA are key components of small nuclear ribonucleoprotein particles (snRNPs), the building blocks of the spliceosome. The biogenesis of snRNPs is a complex process involving multiple cellular and subcellular compartments, the details of which are yet to be described. In short, the snR...
ORGANISM(S): Homo sapiens 
2023-09-08 | E-MTAB-13248 | biostudies-arrayexpress
GenomicsSaccharolobus solfataricus strain:98/2 U2
Sulfolobus solfataricus 98/2 U2 transcriptome - U2 RNA
PRJNA424787 | ENA
GenomicsSaccharolobus solfataricus strain:98/2 U2
Sulfolobus solfataricus 98/2 U2 transcriptome - U2 RNA #2
PRJNA424788 | ENA
TranscriptomicsRNAi profiling by array of human U2-OS cells transfected with PKC delta siRNA and then left untreated or treated with adriamycin
U2-OS cells were transfected with scramble siRNA or PKC delta siRNA, then left untreated or treated with 2 ug/ml adriamycin for 8 h.
ORGANISM(S): Homo sapiens 
2011-03-23 | E-MEXP-2643 | biostudies-arrayexpress
TranscriptomicsCirculating U2 small nuclear RNA fragments as a novel diagnostic biomarker for pancreatic and colorectal adenocarcinoma
Global microRNA expression profiling of serum were collected using Agilent miRNA microarrays (G4471A Human, Amadid 29297, Sanger 14) carrying 887 individual human miRNA probes. Two different sources of RNA were analyzed: serum from NMRI-nu/nu mice carrying a xenograft tumor derived from human prima...
ORGANISM(S): Homo sapiens 
2013-07-01 | E-GEOD-34052 | biostudies-arrayexpress
TranscriptomicsChanges in gene expression in HOS and U2-OS cell lines after exposure to 600 μg/mL OGE
Osteosarcoma (Osteosarcoma) is a type of bone cancer. Eighty percent of this tumor will be metastatic to the lungs or liver, and as a result, patients generally need chemotherapy to improve survival possibility. Recently, anti-tumor activity has been reported in Ocimum gratissimum aqueous extract (O...
ORGANISM(S): Homo sapiens 
2013-06-26 | E-GEOD-48281 | biostudies-arrayexpress
ProteomicsCAPTURE of the human U2 snRNA genes
In order to identify factors involved in transcription of human snRNA genes and 3’ end processing of the transcripts, we have carried out CRISPR affinity purification in situ of regulatory elements (CAPTURE), which is deadCas9-mediated pull-down, of the tandemly-repeated U2 snRNA genes in human cell...
ORGANISM(S): Homo sapiens (Human) 
2022-06-09 | PXD033580 | Pride
Transcription Snrna Interactome 
GenomicsSaccharolobus solfataricus strain:98/2 U2
Saccharolobus solfataricus strain:98/2 U2 Genome sequencing
PRJNA250825 | ENA
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