212-2 - OmicsDI

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Mass Spectrometry (72)
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Instrument Platform

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Impact (2)
LTQ Orbitrap Velos (2)
Direct infusion MS - negative (2)
Direct infusion MS - positive (2)
Gas Chromatography MS - positive (2)
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Liquid Chromatography MS - negative - hilic (2)
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Liquid Chromatography MS - positive - reverse-phase (1)
HCTultra PTM Discovery System (Bruker Daltonics) (1)

Publication Date

2023 (19)
2026 (15)
2010 (14)
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2020 (9)
2012 (8)
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2013 (5)
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UNIPROT ID/AC

P12385 (1)
P05453 (1)
P32471 (1)
P29547 (1)
P36008 (1)
P39730 (1)
P06634 (1)
P34167 (1)
P10081 (1)
P04147 (1)
P39935 (1)
P39936 (1)
P07260 (1)
P38912 (1)
P32911 (1)
P38431 (1)
P06103 (1)
P38249 (1)
Q04067 (1)
P40217 (1)
P32497 (1)
P09032 (1)
P32501 (1)
P12754 (1)
P32502 (1)
P14741 (1)
P09064 (1)
P32481 (1)
P16521 (1)
P20459 (1)

CHEBI ID

CHEBI:28866 (3)
CHEBI:22660 (3)
CHEBI:18186 (3)
CHEBI:18237 (3)
CHEBI:17268 (3)
CHEBI:16737 (3)
CHEBI:16199 (3)
CHEBI:28847 (2)
CHEBI:17057 (2)
CHEBI:18026 (2)
CHEBI:24149 (2)
CHEBI:48430 (2)
CHEBI:30813 (2)
CHEBI:17992 (2)
CHEBI:15361 (2)
CHEBI:90 (2)
CHEBI:17822 (2)
CHEBI:26271 (2)
CHEBI:15753 (2)
CHEBI:22652 (2)
CHEBI:16811 (2)
CHEBI:28300 (2)
CHEBI:16971 (2)
CHEBI:17754 (2)
CHEBI:2651 (1)
CHEBI:29173 (1)
CHEBI:17843 (1)
CHEBI:15996 (1)
CHEBI:17552 (1)
CHEBI:33699 (1)

Metabolite Name

Taurine (3)
Threonine (3)
Proline (3)
Isoleucine (3)
Guanosine (3)
Inosine (3)
Hypoxanthine (3)
Phenol, 2-[4-[(3,5-dichlorophenyl)amino]-6-methyl-2-pyrimidinyl]- (2)
4-Amino-2-oxo-1,2-dihydropyrimidine-5-carboxylic acid (2)
Coniferin (2)
Arachidonic sulfonic acid (2)
4(5H)-Thiazolone, 5-(6-quinolinylmethylene)-2-[(2-thienylmethyl)amino]-, (5Z)- (2)
7-Hydroxy-6-methoxy-3-methyl-5-(propan-2-ylidene)furo[2,3,4-de]chromen-2(5H)-one (2)
3-Methyl-1H-pyrazole-4-carbaldehyde (2)
1,2,4-Benzenetriol (2)
GDP-mannose (2)
Gamma-Glutamylglutamine (2)
Linoleic acid (2)
Adenylsuccinic acid (2)
Galactonic acid (2)
Lys-Asp (2)
Pelargonic acid (2)
LysoPE(20:4(5Z,8Z,11Z,14Z)/0:0) (2)
2-Methyl-3-hydroxybutyric acid (2)
Threonic acid (2)
Aspartate (2)
Naringenin (2)
6-Benzyl-3-butan-2-yl-9-(7-hydroxy-6-oxooctyl)-1,4,7,10-tetrazabicyclo[10.4.0]hexadecane-2,5,8,11-tetrone (2)
MES (2)
LPG(18:1(9Z)) (2)

First Public Date

2014 (12)
2023 (3)
2021 (3)
2018 (3)
2015 (3)
2026 (2)
2025 (2)
2024 (2)
2020 (2)
2019 (2)
2016 (2)
2013 (2)
2022 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Department of Biotechnology, TU Delft, The Netherlands (5)
Howard Hughes Medical Institute NYU School of Medicine-Smilow Research Center Biochemistry Department (2)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (2)
"Institute of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Guangzhou 510006, China" (1)
1 Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
1Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands 2Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (1)
Assoc. Prof. at Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark (1)
Bioanalytical Mass Spectrometry Facility Mark Wainwright Analytical Centre University of NSW Australia (1)
Biomolecular Mass Spectrometry and Proteomics Utrecht University (1)
Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Sao Paulo, Brazil. (1)
CERELA CONICET - Argentina (Reference Center for Lactobacilli, National Scientific and Technical Research Council - Argentina) (1)
Center for Cancer Research,Medical University of Vienna,Borschke-Gasse 8a,1090 Vienna (1)
Centre for Environmental Biotechnology, Bangor University, Deiniol Rd, Bangor, LL57 2UW, UK School of Natural Sciences, Bangor University, Deiniol Rd, Bangor, LL57 2UW, UK (1)
Cleveland Clinic Center for Experimental Therapeutics (1)
Cleveland Clinic Lerner College of Medicine of Case Western Reserve University School of Medicine, Cleveland, OH Cleveland Clinic Center for Therapeutics Discovery, Cleveland Clinic Research, Cleveland, OH (1)
Coordenadora do laboratório de espectrometria de massas, LNBio, CNPEM, Brasil. (1)
Crop Research Institute, Prague, Czechia (1)
Department for Biochemistry and Molecular Biology University of Southern Denmark Odense, Denmark (1)
Department of Biochemistry, Molecular Plant Biology, Tykistökatu 6 A , Turku 20520, Finland (1)
Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel (1)
Department of Biotechnology, Applied Sciences, Delft University of Technology, The Netherlands (1)
Department of Cellular and Molecular Medicine and Ottawa Institute of Systems Biology, University of Ottawa, Canada (1)
Department of Clinical Microbiology, Sahlgrenska University Hospital, Gothenburg, Sweden (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institute, Sweden (1)
Department of Medicine, Division of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. (1)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada, N1H 1N8 (1)
Dept. Oncology-Pathology, SciLifeLab, Karolinska Institutet, Sweden (1)
Division Systems Biology of Signal Transduction, German Cancer Research Center (DKFZ), Heidelberg, 69120, Germany (1)
Division of Cell Matrix Biology and Regenerative Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Science Centre, Manchester, M13 9PL, UK. (1)

IsPrivate

False (2)

Classification

viruses (1)
bacteria (1)

Modification

4'-dihydroxyphenylalanine (1)
Not available (1)

Study type

Transcription profiling by array (47)
RNA-seq of coding RNA (9)
ChIP-chip by tiling array (3)
Comparative genomic hybridization by array (2)
Other (2)
Human - Two-color microarray (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Methylation profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (141)
2021 (132)
2023 (129)
2024 (104)
2025 (86)
2020 (84)
2019 (70)
2018 (66)
2017 (53)
2016 (41)
2015 (41)
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2010 (19)
2013 (17)
2008 (15)
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2006 (3)
2003 (1)
2002 (1)
1999 (1)

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Lactiplantibacillus plantarum strain:RKG 2-212

Lactiplantibacillus plantarum strain:RKG 2-212 Genome sequencing

PRJNA632863 | ENA

Striatal microRNA controls cocaine intake through CREB signalling

MicroRNAs (miRNAs) regulate many basic aspects of cell biology including neuronal plasticity, but little is known of their roles in drug addiction. Extended access to cocaine can trigger the emergence of compulsive drug-seeking behaviors, but molecular mechanisms regulating this process remain uncle...

ORGANISM(S): Rattus norvegicus

2010-07-08 | E-GEOD-21901 | biostudies-arrayexpress

Behavioral, biochemical and histopathological toxic profiles induced by sub-chronic cannabimimetic WIN55, 212-2 administration in mice.

Not available

S-EPMC9906926 | biostudies-literature

SCN circadian proteomes of miR-132/212 KO and WT mice by super-SILAC-based quantitative mass spectrometry

To identify potential mechanisms underlying the phenotype of miR-132/212 KO mice under short photoperiods, we used quantitative mass spectrometry to analyze the SCN proteomes of miR-132/212 KO and WT mice under a 8:16 LD schedule at 4 time points, spaced 6h apart, across a 24h cycle (n=4 per time po...

ORGANISM(S): Mus musculus (Mouse)

2017-04-24 | PXD003635 | Pride

FOXP1 inhibits cell growth and attenuates tumorigenicity of neuroblastoma

Single-color gene expression profiles from 3 neuroblastoma cell lines were generated using 44K oligonucleotide microarrays. To gain insights into the molecular processes occurring upon FOXP1 re-expression, we performed series of time-resolved gene expression measurements in FOXP1 and GFP transgenic ...

ORGANISM(S): Homo sapiens

2014-10-17 | E-GEOD-62419 | biostudies-arrayexpress

Gene expression study in Neuroblastoma after BET inhibition

We studied transcriptional changes by Illumina HumanHT-12 v4 microarrays in 2 Neuroblastoma cell lines after i-BET-726 treatment 2 neuroblastoma cell lines SK-N-SH and CHP-212 were treated with i-BET-726 at 100nM or 1uM concentrations for 16 hrs to study gene expression.

ORGANISM(S): Homo sapiens

2013-08-23 | E-GEOD-47386 | biostudies-arrayexpress

Phase 2 Dose-Finding Study in Patients with Gout Using SEL-212, a Novel PEGylated Uricase (SEL-037) Combined with Tolerogenic Nanoparticles (SEL-110).

Not available

S-EPMC10326180 | biostudies-literature

Topical WIN 55 212-2 Confers Long-Term Intraocular Pressure-Independent Neuroprotection in the DBA/2J Mouse Model of Glaucoma.

Not available

S-EPMC12548100 | biostudies-literature

Screening of differentially expressed genes after DBDx treatment

The whole human genome microarray was used to analyze the differentially expressed genes in MIA PaCa-2 xenograft after DBDx treatment. A total of 255 genes were down-regulated and 212 genes were up-regulated by at least 2-fold between DBDx-treated and saline-treated group. The most obvious changes i...

ORGANISM(S): Homo sapiens

2018-12-09 | GSE123521 | GEO

To interact or not to interact: The pros and cons of including interactions in linear regression models.

Not available

S-EPMC11805792 | biostudies-literature

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