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TranscriptomicsTranscriptional profiling of calyx abscission zone cells of citrus fruits and adjacent fruit rind cells during ethylene-promoted fruit abscission
Abscission is a cell separation process that takes place in particular positions of the plant body named abscission zones. In citrus, maturing fruits are shed through the calix abscission zone, which is composed by 10-15 cell layers located at the boundary between the calyx button and the fruit rind...
ORGANISM(S): Citrus sinensis 
2017-02-08 | E-MTAB-4538 | biostudies-arrayexpress
no omics definedTranscription profiling of petioles and laminar abscission zone enriched tissues from Citrus clementina following ethylene treatment
Transcription profiling of the ethylene-induced abscission process in laminar abscission zone enriched tissues and petiole of debladed mature citrus leaf explants. Samples taken at 0, 6, 12, 24 and 36h after ethylene treatment (10 ul/l) were compared.
ORGANISM(S): Citrus clementina 
2008-12-31 | E-MEXP-1428 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of laser-microdissected cells from laminar abscission zone and petiolar cortical tissue during ethylene-promoted abscission in citrus leaves
Transcription profiling of the ethylene-induced abscission process in laminar abscission zone cells and petiolar cortical cells of debladed mature citrus leaf explants. Samples taken at 24h after ethylene treatment (10 ul/l) were compared.
ORGANISM(S): Citrus clementina 
2009-10-31 | E-MEXP-2018 | biostudies-arrayexpress
ProteomicsCandidate proteins involved in the calyx abscission process of ‘Kuerlexiangli’ (Pyrus sinkiangensis Yu) identified by iTRAQ analysis
‘Kuerlexiangli’ (Pyrus sinkiangensis Yu) is an important market pear in China. The shape and quality of the fruit is negatively affected by the presence of a persistent calyx. Here, to explore the molecular mechanism of calyx abscission, we designed an experiment to compare protein expression at two...
ORGANISM(S): Pyrus x bretschneideri 
2020-06-17 | PXD012499 | Pride
Itraq Pear Calyx abscission Differentially abundant proteins 
ProteomicsProteomes and Ubiquitylomes Analysis Reveals the Involvement of Ubiquitination in Protein Degradation in rosa hybrida during petal abscission.
We employed Non-standard quantitative techniques and quantitative proteomics techniques based on mass spectrometry to perform proteomics analyses for the petal abscission zone of rose petal at stage 3 stage 5. In total, 6595 proteins were detected, we compared differentially expressed proteins (DEPs...
ORGANISM(S): Rosa chinensis 
2023-03-11 | PXD036665 | Pride
Abscission zone Proteomes Rose 
TranscriptomicsTranscriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq
The receptor-like protein kinases encoded by HAESA (HAE) and HAESA-LIKE 2 (HSL2) are essential for floral organ abscission in Arabidopsis thaliana and the double hae hsl2 mutant fails to abscise. Expression of HAE and HSL2 is specific to Abscission Zone (AZ) cells and is higher in stage 15 flowers t...
ORGANISM(S): Arabidopsis thaliana 
2013-01-14 | E-GEOD-35288 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of stamen abscission zone cells from Arabidopsis over five developmental stages from prepollination to organ shed
We conducted transcriptional profiling of laser-captured stamen abscission zone cells over five developmental stages from prepollination to organ shed.
ORGANISM(S): Arabidopsis thaliana 
2008-06-15 | E-MEXP-1474 | biostudies-arrayexpress
ProteomicsProteomes and Ubiquitylomes Analysis in rosa hybrida during petal abscission.
The ubiquitome dataset by imputing missing values and normalization of 6844 ubiquitin modified peptides, 7026 lysine ubiquitination (Kub) site were defined in 2720 proteins, of which 3718 Kub site in 1379 proteins were quantified. Among these quantified Kub sites and proteins, 139 sites in 100 prote...
ORGANISM(S): Rosa chinensis 
2023-03-11 | PXD036672 | Pride
Ubiquitination Rosa hybrida Petal abscission 
GenomicsOil Palm Fruit Abscission Zone Transcriptome
Oil Palm Fruit Abscission Zone Transcriptome
PRJNA700429 | ENA
TranscriptomicsTranscriptome responses in the abscission, distal and proximal regions of the flower pedicel during shedding of flower in Euphorbia pulcherrima
The aim of this study is to assess the global transcriptome changes during the shedding of the flower, which normally takes around 6 or 7 days. We selected four time points (from day 0 to day 6) and three different tissues within the flower bud; distal, abscission and proximal zones with three biolo...
ORGANISM(S): Euphorbia pulcherrima 
2017-12-31 | E-MTAB-6282 | biostudies-arrayexpress
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