Agarwal R R - OmicsDI

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Unknown (2118)
Genomics (103)
Transcriptomics (41)
Proteomics (19)
Metabolomics (10)

Organisms

Caenorhabditis elegans (96)
Homo sapiens (22)
Acidithiobacillus ferrooxidans ATCC 53993 (18)
Aerococcus urinae NBRC 15544 = CCUG 36881 (18)
Allexis (18)
Arabidopsis thaliana (18)
Cyanophora paradoxa (18)
Ensifer adhaerens (18)
Enterococcus faecalis (18)
Globicatella sanguinis (18)
Histomonas meleagridis (18)
Human immunodeficiency virus 1 (18)
Leishmania major strain Friedlin (18)
Listeria monocytogenes (18)
Lotus japonicus (18)
Marchantia polymorpha (18)
Medicago truncatula (18)
Methylohalobius crimeensis 10Ki (18)
Mus musculus (18)
Mus musculus (16)
Oryza coarctata (1)
Cicer arietinum (1)
Brassica juncea (1)
Streptococcus pyogenes (1)
mixed sample (1)
Saccharomyces cerevisiae S288C (1)
Solanum tuberosum (1)
Triticum aestivum (1)
Saccharomyces cerevisiae (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (143)
pride (18)
MetaboLights (9)
EGA (1)
GNPS (1)
MassIVE (1)

Tissue

Blood plasma (2)
Blood serum (1)
Brain (1)
Cell culture (1)
Early embryonic cell (1)
Kidney (1)
Macrophage (1)
Plant cell (1)
Shoot (1)

Disease

Primary acute lymphoblastic leukemia (1)
Pretreatment primary leukemia (1)
Acute promyelocytic leukemia (1)
Acinetobacter infectious disease (1)
Disease free (1)
Parkinson's disease (1)
Polycystic ovary syndrome (1)
Prostate cancer (1)
Pulmonary tuberculosis (1)

Technology Type

Mass Spectrometry (18)
Mass spectrometry (8)
Shotgun proteomics (8)
Data-dependent acquisition (5)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (2)
HDMSE (2)
Mass spectrometry assay (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
FastPrep-24 5G bead beater, Qubit Fluorometer (1)
12 well TC-treated plate, LETs buffer, dry ice (1)
N/A (1)
Illumina NovaSeq 6000 (1)
LTQ FT (1)
MaXis (1)
Orbitrap Exploris 480 (1)
Flame ionisation detector MS - (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2011 (43)
2013 (42)
2012 (22)
2015 (10)
2023 (10)
2014 (7)
2008 (6)
2016 (5)
2025 (5)
2026 (4)
2010 (4)
2009 (3)
2018 (3)
2022 (2)
2020 (2)
2006 (1)
2024 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:35038 (3)
CHEBI:16359 (3)
CHEBI:28865 (3)
CHEBI:143745 (2)
CHEBI:182784 (2)
CHEBI:143757 (2)
CHEBI:195271 (2)
CHEBI:139138 (2)
CHEBI:34687 (2)
CHEBI:173703 (2)
CHEBI:27997 (2)
CHEBI:73858 (2)
CHEBI:34494 (2)
CHEBI:75342 (2)
CHEBI:80774 (2)
CHEBI:64563 (2)
CHEBI:30769 (2)
CHEBI:27432 (2)
CHEBI:181874 (1)
CHEBI:195269 (1)
CHEBI:75567 (1)
CHEBI:195266 (1)
CHEBI:195267 (1)
CHEBI:195270 (1)
CHEBI:194553 (1)
CHEBI:194552 (1)
CHEBI:194551 (1)
CHEBI:195272 (1)
CHEBI:191103 (1)
CHEBI:34686 (1)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Succinate (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
Monoolein (2)
Elaidic acid (2)
9(10)-EpOME (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
3beta-Hydroxy-5-cholenoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)
1-Hexadecanoyl-sn-glycerol (1)
9-Octadecenamide, (Z)- (1)
Ethanol, 2-(2-butoxyethoxy)- (1)
Alpha-TOCHOPHERYL ACETATE (1)
NCGC00186665-03!2,3-dihydroxypropyl hexadecanoate (1)

Study type

ChIP-seq (102)
Transcription profiling by array (27)
RNA-seq of coding RNA (6)
RNA-seq of non coding RNA (4)
Methylation profiling by array (2)
ChIP-chip by tiling array (1)
Other (1)

Release Date

2022 (303)
2021 (256)
2025 (231)
2024 (206)
2023 (199)
2020 (192)
2019 (131)
2016 (115)
2018 (107)
2017 (78)
2013 (76)
2015 (75)
2011 (68)
2014 (56)
2012 (55)
2010 (30)
2026 (23)
2009 (23)
2008 (21)
2007 (7)
2006 (6)
2004 (1)
2003 (1)
2001 (1)

Lab affiliation

1Environmental Biotechnology and Genomics Laboratory, School of the Environment, Florida A&M University, Tallahassee, FL- 32307, USA (1)
Associate Professor Translational Health Science and Technology Institute NCR Biotech Science Cluster 3rd Milestone,Gurugram-Faridabad Expressway Faridabad-121001 (1)
Astbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, School of Molecular and Cellular Biology, University of Leeds, Leeds, LS2 9JT (1)
CSIR-CCMB (1)
Core Facility for Mass Spectrometry and Proteomics, Center for Molecular Biology of Heidelberg University (ZMBH) (1)
Department of Obstetrics and Gynecology PEDEGO Research Unit, Medical Research Center Oulu University Hospital, University of Oulu Kajaanintie 50, BOX 5000, 90014 Oulu, FINLAND (1)
Department of Otorhinolaryngology - Head and Neck Surgery, University of Helsinki and Helsinki University Hospital, Helsinki, Finland (1)
Department of Radiology Canary Center at Stanford for Cancer Early Detection Palo Alto, CA USA (1)
Integrative Parasitology, Centre for Infectious Diseases, University Hospital Heidelberg, Heidelberg University Medical Faculty; Heidelberg, Germany (1)
Laboratory of Mycobacterial Genetics, Translational Health Science and Technology Institute, Faridabad, India (1)
Molecular Genetics Laboratory, Infection and Immunology Division, Translational Health Science and Technology Institute, India (1)
National Institute of Immunology, New Delhi, India (1)
School of Chemistry & Biochemistry College of Sciences Georgia Institute of Technology (1)
The University of Melbourne (1)
Translational Health Science and Technology Institute NCR Biotech Science Cluster 3rd Milestone, Gurugram-Faridabad Expressway Faridabad-121001 (1)
Translational Helath Science and Technology Institute, NCR Biotech Science Cluster, Faridabad , Haryana, India ( lab head ) (1)
Transplantation laboratory, Haartmaninkatu 3, PO Box 21, FI-00014 University of Helsinki, Finland. And HUSLAB, Helsinki University Hospital, Finland. (1)
University of Oxford, Discovery Proteomics Facility, Target Discovery Institute (1)

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Cardiometabolic risk factors in the Agarwal business community in India: Jaipur Heart Watch-6.

Not available

S-EPMC4561780 | biostudies-literature

Pharmacokinetics of polatuzumab vedotin in combination with R/G-CHP in patients with B-cell non-Hodgkin lymphoma.

Not available

S-EPMC7188703 | biostudies-literature

Implications of Porphyromonas gingivalis peptidyl arginine deiminase and gingipain R in human health and diseases.

Not available

S-EPMC9559808 | biostudies-literature

From biorepositories to data repositories: Open-access resources accelerate early R&D and validation of equitable diagnostic tools.

Not available

S-EPMC10426984 | biostudies-literature

Long-term Survival and Quality of Life among Survivors Discharged from a Respiratory ICU in North India: A Prospective Study.

Not available

S-EPMC9983681 | biostudies-literature

Subjective social isolation or loneliness in older adults residing in social housing in Ontario: a cross-sectional study.

Not available

S-EPMC8486468 | biostudies-literature

Global proteomic analysis for stress response of Mycobacterium tuberculosis

To expand an insight into the stress adaptation in Mycobacterium tuberculosis H37Rv (Mtb), we approached the iTRAQ analysis to understand the global proteome profile of stressed Mtb under Acid (5.5 pH), Diamide (5mM) and Hydrogen peroxide (H2O2) (5mM) conditions and compared with gene expression of ...

ORGANISM(S): Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis

2022-10-13 | PXD015167 | Pride

Itraq mtb stres response

Effect of depletion of clpP2, clpX and clpC1 genes on whole cell proteome profile of Mycobacterium tuberculosis H37Rv

Global protein alteration in Mycobacterium tuberculosis H37 RV ( Mtb-H37RV) having depletion of Clpx ,Clp2 and ClpC1 were accessed using 4 plex iTRAQ label.

ORGANISM(S): Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis

2020-05-14 | PXD013589 | Pride

Mycobacterium clp

Effect of deletion of htpG on global proteomic profile of M. tuberculosis H37Rv

The main objective of this study is to understand the effect of deletion of htpG on protein expression profile of M. tuberculosis H37Rv. Whole cell lysates were prepared from 4 biological replicates of the wild-type control and the ∆htpG knockout strains by bead beating in 1X PBS containing protease...

ORGANISM(S): Mycobacterium tuberculosis H37Rv

2023-07-20 | PXD039393 | Pride

Htpg Mycobacterium tuberculosis Itraq

A Comprehensive Genome-wide Study on Tissue- and Abiotic Stress-specific miRNAs in Triticum aestivum

Purpose: To identify abiotic stress responsive and tissue specific miRNAs at genome wide level in wheat (Triticum aestivum) Results: Small RNA libraries were constructed from four tissues (root, shoot, mature leaf and spikelets) and three stress treatments of wheat seedlings (control, high temperat...

ORGANISM(S): Triticum aestivum

2014-08-20 | E-GEOD-53487 | biostudies-arrayexpress

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2291 Results

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