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TranscriptomicsThe genomic distribution of sex-biased genes in Drosophila serrata: X-chromosome demasculanisation, feminisation, and hyper-expression in both sexes
Data from whole-body, head, thorax, abdomen, ovaries, testes and accessory glands was used to assess possible causes of a non-random distribution of sex-biased genes (sexually dimorphic expression). All samples were derived from virgin adult flies. We measured gene expression of male and female Dros...
ORGANISM(S): Drosophila serrata 
2013-11-05 | E-GEOD-45801 | biostudies-arrayexpress
UnknownMulti-network-based diffusion analysis reveals vertical cultural transmission of sponge tool use within dolphin matrilines.
Not available
S-EPMC6685002 | biostudies-literature
UnknownTool use and social homophily among male bottlenose dolphins.
Not available
S-EPMC6571475 | biostudies-literature
TranscriptomicsTranscription profiling time series of the response of Rattus norvegicus nasal epithelial cells to treatment with various doses of formaldehyde
Formaldehyde, an important industrial chemical, is used for multiple commercial purposes throughout the industrialized world. This simple, one carbon aldehyde is a natural metabolite formed in cells throughput the body. However, it is also a rodent nasal carcinogen, when inhaled by rats every day ...
ORGANISM(S): Rattus norvegicus 
2007-10-25 | E-GEOD-7002 | biostudies-arrayexpress
UnknownAffiliation history and age similarity predict alliance formation in adult male bottlenose dolphins.
Not available
S-EPMC7083095 | biostudies-literature
TranscriptomicsRNA-seq alignment to individualized genomes
The source of most errors in RNA sequencing (RNA-seq) read alignment is in the repetitive structure of the genome and not with the alignment algorithm. Genetic variation away from the reference sequence exacerbates this problem causing reads to be assigned to the wrong location. We developed a metho...
ORGANISM(S): Mus musculus 
2014-06-10 | E-GEOD-45684 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation and RNA-seq analysis in purified quiescent yeast cells to identify the genomic RNA polymerase II and histone H3 methylation occupancy profiles and the quiescent cell transcriptome.
A defining characteristic of quiescent cells is their low level of gene activity compared to growing cells. Using a yeast model for cellular quiescence, we compared the genome-wide profiles of multiple histone modifications between growing and quiescent cells, and correlated these profiles with the...
ORGANISM(S): Saccharomyces cerevisiae 
2016-09-01 | E-GEOD-72650 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human whole blood from pediatric septic shock patients
In an ongoing translational research program involving microarray-based expression profiles in pediatric septic shock, we have now conducted longitudinal studies focused on the temporal expression profiles of canonical signaling pathways and gene networks. Genome-level expression profiles were gener...
ORGANISM(S): Homo sapiens 
2008-06-16 | E-GEOD-8121 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human SIRS and septic shock patients reveals
Goal of the experiment: To identify correlated genes, pathways and groups of patients with systemic inflammatory response syndrome and septic shock that is indicative of biologically important processes active in these patients. Background: We measured gene expression levels and profiles of childr...
ORGANISM(S): Homo sapiens 
2008-06-13 | E-GEOD-4607 | biostudies-arrayexpress
TranscriptomicsGene expression profiling of metastatic lung cancer cell lines
During malignant disease progression, the extracellular matrix (ECM) of epithelial tumors accumulates inter-molecular cross-links between collagen strands; these cross-links enhance ECM stiffness and trigger tumor cell invasion and dissemination, but the mechanisms that regulate intra-tumoral collag...
ORGANISM(S): Mus musculus 
2015-03-12 | E-GEOD-49315 | biostudies-arrayexpress
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