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Traditional medicinal plants are rich reservoirs of antimicrobial agents, including antimicrobial peptides (AMPs). Herein, Amaranthus tricolor AMPs predicted in silico are identified via proteomics profiling. Bottom-up proteomics identified seven novel peptides spanning three AMP classes including l...
ORGANISM(S): Amaranthus tricolor 
2021-04-08 | PXD022242 | Pride
PepSAVI-MS, a mass spectrometry-based peptidomics pipeline, was implemented for antimicrobial peptide (AMP) discovery in the medicinal plant Amaranthus tricolor. This investigation revealed a novel 1.7 kDa AMP, deemed Atr-AMP1. Initial efforts to determine the sequence of Atr-AMP1 utilized chemical ...
ORGANISM(S): Amaranthus tricolor 
2020-05-26 | PXD014547 | Pride
Amaranthus tricolor Raw sequence reads
De novo genome assembly of Amaranthus tricolor
Amaranthus tricolor cultivar:Dahong Raw sequence reads
Genetic diversity of Amaranthus tricolor genetic resources based on genome-wide SNPs
Transcriptome sequencing and comparative analysis during the induction of in vitro flowering in Amaranthus tricolor Transcriptome or Gene expression
Amaranthus tricolor Assembly
Amaranthus tricolor overview
Plant defensins are a broadly distributed family of antimicrobial peptides which have been primarily studied for agriculturally relevant antifungal activity. Recent studies have probed defensins against gram negative bacteria revealing evidence for multiple mechanisms of action including membrane ly...
ORGANISM(S): Escherichia coli 
2021-04-14 | PXD024138 | Pride
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