Amr - OmicsDI

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Genomics (1305)
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Genomic (1)

Organisms

Homo sapiens (33)
Clostridioides difficile (6)
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Staphylococcus aureus (3)
Saccharomyces cerevisiae (2)
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Aeromonas hydrophila (1)
Mus musculus cytomegalovirus 2 (1)
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Mycobacteroides abscessus (1)
Betapolyomavirus macacae (1)
human gammaherpesvirus 4 (1)
JC polyomavirus (1)
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Organisms

Escherichia coli (61)
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wastewater metagenome (10)
Pseudomonas aeruginosa (10)
Salmonella enterica (8)
Brucella melitensis (5)
Gammaproteobacteria (5)
Salmonella enterica subsp. enterica (5)
Acinetobacter baumannii (5)
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Clostridioides difficile (4)
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Neisseria gonorrhoeae (4)
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aquatic metagenome (4)
Bacteria (4)
Yersinia pestis (3)
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bovine gut metagenome (3)
feces metagenome (3)
mouse gut metagenome (3)
soil metagenome (3)
Mammaliicoccus sciuri (2)
poultry litter metagenome (2)
Acinetobacter (2)
Salmonella enterica subsp. enterica serovar Typhimurium (2)
Enterobacterales (2)

Repository

ENA (1293)
pride (48)
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Technology Type

Mass Spectrometry (48)
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Impact (9)
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None (1)
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Liquid Chromatography MS - positive (1)
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2025 (25)
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2020 (2)
2011 (1)
2009 (1)
2017 (1)

CHEBI ID

CHEBI:178019 (1)
CHEBI:178018 (1)
CHEBI:178016 (1)
CHEBI:178015 (1)
CHEBI:178017 (1)
CHEBI:145243 (1)
CHEBI:176382 (1)
CHEBI:174210 (1)
CHEBI:88097 (1)
CHEBI:24116 (1)
CHEBI:86910 (1)
CHEBI:176327 (1)
CHEBI:17859 (1)

Metabolite Name

Carboxyamidotriazole (1)
2-(Dibutylamino)-1-[(9Z)-2,7-dichloro-9-[(4-chlorophenyl)methylidene]fluoren-4-yl]ethanol (1)
Pro Ile Asp (1)
1-[(3-fluorophenyl)methyl]-3-pyrrolidin-1-ylsulfonylpyridin-2-one (1)
PE(15:1/0:0) (1)
Ser Val Asp (1)
Brassidic acid (1)
Cer(d18:0/PGJ2) (1)
DIDP (1)
90 (1)
80 (1)
70 (1)
60 (1)
50 (1)
40 (1)
30 (1)
3-(((4,7-Dichloro-1,3-benzoxazol-2-yl)methyl)amino)-5-ethyl-6-methylpyridin-2(1H)-one (1)
3-O-Sulfogalactosylceramide (32:1) (1)
Cysteinyl-aspartate (1)
PA(40:8) (1)
DG(31:3) (1)
LysoPE(14:0) (1)
OxPS 36:5+1O (1)
1a-hydroxy-21-nor-20-oxavitamin D3 (1)
1-AMINOCYCLOBUTANE CARBOXYLIC ACID (1)
D-Galactose 1-Phosphate (1)
1-Dodecanamine (1)
12-Hydroxyhexadecanoylcarnitine (1)
Homoavicholic acid (1)
Ile Asn (1)

First Public Date

2025 (288)
2026 (249)
2024 (219)
2023 (134)
2022 (126)
2021 (97)
2020 (83)
2019 (33)
2018 (30)
2017 (20)
2016 (8)
2014 (4)
2015 (2)

Classification

bacteria (202)
viruses (3)

Study status

Not provided (2)
Recruiting (1)

Study type

Transcription profiling by array (5)
Methylation profiling by array (4)
Interventional (3)
ChIP-seq (2)
Human - One-color microarray (1)
Genotyping by array (1)
Other (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (1074)
2023 (790)
2024 (746)
2022 (736)
2021 (566)
2020 (351)
2019 (246)
2018 (153)
2026 (152)
2017 (78)
2016 (47)
2015 (30)
2014 (19)
2013 (9)
2010 (6)
2012 (4)
2011 (4)
2009 (1)
2008 (1)
2007 (1)
2005 (1)
2003 (1)
1999 (1)

Lab affiliation

Department of Synthetic Chemistry & Biological Chemistry, Graduate School of Engineering, Kyoto Univ. Katsura, Kyoto 615-8510, JAPAN (3)
School of Biological and Behavioural Sciences Queen Mary University of London (2)
Institute of Biochemistry II - Goethe-Universität Frankfurt am Main (2)
Peter Lasch, Centre for Biological Threats and Special Pathogens, Proteomics and Spectroscopy (ZBS6), Berlin, Germany (1)
Erasmus MC, University Medical Center Rotterdam, Department of Neurology, Clinical and Cancer Proteomics (1)
University of Oslo Faculty of Medicine Department of Microbiology (1)
Centre to Impact AMR, Monash University; Clayton, 3800, Australia Infection Program, Biomedicine Discovery Institute and Department of Microbiology, Monash University; Clayton, 3800, Australia (1)
Helmholtz Institute for Pharmaceutical Research Saarland, Microbial Natural Products (1)
Research Center for Integrative Evolutionary Science, The Graduate University for Advanced Studies (SOKENDAI) (1)
Robert Koch Institute, Centre for Biological Threats and Special Pathogens, Proteomics and Spectroscopy (ZBS6), Berlin, Germany (1)
Department of Pharmacology, University of Oxford, United Kingdom (1)
Research Institute for Microbial Diseases, Osaka University,Japan (1)
LMU München (1)
Institute of Medical Science, The University of Tokyo (1)
3Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, The Netherlands. 4Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, The Netherlands. (1)
Department of Molecular Physiology, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands (1)
Member, Stanford Cancer Institute (1)
Director (1)
Department of Genetics, Research Institute of Environmental Medicine (RIEM), Nagoya University (1)
School of Pharmacy, University College London, 29-39 Brunswick Square, London WC1N 1AX (1)
laboratory of Protein Degradation, Institute for Advanced Life Science, Hoshi University (1)
Toronto General Hospital Research Institute, UniversityHealth Network, Toronto, Canada Department of Medicine, Division of Nephrology, University Health Network, Toronto, Canada (1)
University of Tsukuba (1)
Lipolysis and Bacterial Pathogenicity Team LISM UMR7255 CNRS 31 chemin Joseph Aiguier - CS 70071 F 13402 MARSEILLE cedex 09 FRANCE (1)
Dep. Mol. Cell Biology, Med. Inst. Bioreg., Kyushu University (1)
Lund University, Dept. Biomedical Engineering (1)
Institute of Low Temperature Science, Hokkaido University (1)
Chemical and Biological Signatures Group, Pacific Northwest National Laboratory (1)
Professor, Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology (NTNU), PO Box 8905, N-7491, Trondheim, Norway Phone: +47 72573075, Fax: +47 72576400 (1)
Lipolysis and Bacterial Pathogenicity Team, LISM UMR7255 CNRS, 32 chemin Joseph Aiguier - CS 70071, F-13402 Marseille cedex 09 (lab head) (1)

Location

Ecuador (1)
Greece (1)
China (1)
Netherlands (1)

Keyword

Colonoscopy (2)
Re-examination (1)
Lower Gastrointestinal Tract (1)
Retroflexion (1)
Artificial intelligence (1)

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HEK293T cells were transfected with the Rbp1-amr or slow (R729H-amr) Î±-amanitin resistant subunit of RNA Pol II and selected with Î±-amanitin 24 hours after transfection for additional 24 hours

HEK293T cells were transfected with the Rbp1-amr or slow (R729H-amr) Î±-amanitin resistant subunit of RNA Pol II and selected with Î±-amanitin 24 hours after transfection for additional 24 hours. Total RNA was extracted and global changes in gene expression were determined using microarray chips. Mi...

ORGANISM(S): Homo sapiens

2013-07-01 | E-GEOD-48163 | biostudies-arrayexpress

Enrichment Culture AMR-1

Enrichment Culture AMR-1 Raw sequence reads

sequences for the project FWD-AMR

PRJEB57330 | ENA

Antibiotic resistance detection and concomitant species identification of ESKAPE pathogens by proteomics

Antimicrobial resistance (AMR) is an increasing challenge for therapy of bacterial infections. Currently, patient treatment is guided by antimicrobial susceptibility testing (AST) using phenotypic assays and species identification by MALDI-ToF biotyping. Bacterial phenotype prediction using omics te...

ORGANISM(S): Klebsiella grimontii Pseudomonas aeruginosa PA103 Klebsiella oxytoca Shigella sonnei Citrobacter freundii complex Acinetobacter baumannii Klebsiella quasipneumoniae Morganella morganii subsp. morganii Enterococcus faecium Com15 Enterobacter cloacae Proteus mirabilis Klebsiella pneumoniae Escherichia coli Staphylococcus aureus

2026-03-02 | PXD056051 | Pride