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MetabolomicsAn untargeted metabolomics approach to characterize short-term and long-term metabolic changes after bariatric surgery
Bariatric surgery is currently one of the most effective treatments for obesity and leads to significant weight reduction, improved cardiovascular risk factors and overall survival in treated patients. To date, most studies focused on short-term effects of bariatric surgery on the metabolic profile ...
2015-09-15 | MTBLS218 | MetaboLights
ProteomicsThe Pd (II) reduction mechanisms in Bacillus megaterium Y-4 revealed by proteomic analysis
Many studies have been conducted on microbial reduction of Pd (II) to palladium nanoparticles (PdNPs) due to the environmental friendliness, low cost and the decreased toxicity of Pd (II) ions. In this study, we investigate the reduction mechanism of Pd (II) by Bacillus megaterium Y-4 through proteo...
ORGANISM(S): environmental samples <bacteria 
2024-05-24 | PXD049711 | Pride
Lc-msms Bacillus megaterium 
ProteomicsDifferentially expressed proteins between WT Y. pestis and ΔhmwC
Differentially expressed proteins between WT Y. pestis and ΔhmwC
ORGANISM(S): Yersinia Pestis Co92 
2023-06-12 | PXD042928 |
GenomicsGenome-wide distribution of AdpA, a global regulator for secondary metabolism and morphological differentiation in Streptomyces, revealed the extent and complexity of the AdpA regulatory network.
This SuperSeries is composed of the following subset Series: GSE33992: Streptomyces griseus transcriptome analysis in solid culture with delta adpA, encoding a global transcriptional regulator involved in morphological differentiation and secondary metabolism GSE33993: Streptomyces griseus transcrip...
ORGANISM(S): Streptomyces griseus 
2012-04-03 | E-GEOD-33994 | biostudies-arrayexpress
TranscriptomicsAn Arabidopsis Mutant Resistant to Thaxtomin A, a Cellulose Synthesis Inhibitor from Streptomyces Sp
Thaxtomin A is a phytotoxin produced by Streptomyces scabies and other Streptomyces species, the causative agents of common scab disease in potato and other taproot crops. At nanomolar concentrations, thaxtomin causes dramatic cell swelling, reduced seedling growth, and inhibition of cellulose synth...
ORGANISM(S): Arabidopsis thaliana 
2005-12-19 | E-GEOD-3873 | biostudies-arrayexpress
TranscriptomicsIdentification of nucleosome positions at hox TSSs during zebrafish embryonic development
Nucleosome arrangement in promoter regions has been shown to play an important role in gene regulation. Genome wide studies in yeast, flies, worms, mammalian ES and transformed cell lines have found well positioned nucleosomes with an area of nucleosome depletion flanking transcription start sites....
ORGANISM(S): Danio rerio 
2013-12-09 | E-GEOD-43757 | biostudies-arrayexpress
TranscriptomicsNucleosome mapping in Saccharomyces cerevisiae in different conditions
This experiment aims to map nucleosome positions and comparison of the same in WT NORMAL GROWTH vs WT-NUTRIENT STARVATION/isw1∆2∆ MUTANT/rsc4-∆4 MUTANT in Saccharomyces cerevisiae using a custom designed tiling array on Agilent plat form. The corresponding platform is submitted to GEO under Geo-ID...
ORGANISM(S): Saccharomyces cerevisiae 
2013-06-21 | E-GEOD-39802 | biostudies-arrayexpress
UnknownWhole-genome sequencing analysis of Y chromosome microdeletion: a case report.
Not available
S-EPMC7739111 | biostudies-literature
MetabolomicsDifferential role of sphingomyelin in influenza virus, rhinovirus and SARS-CoV-2 infection of Calu-3 cells
Host cell lipids play a pivotal role in the pathogenesis of respiratory virus infection. However, a direct comparison of the lipidomic profile of influenza virus and rhinovirus infections is lacking. In this study, we first compared the lipid profile of influenza virus and rhinovirus infection in a ...
2022-11-15 | MTBLS2352 | MetaboLights
UnknownGene repression via multiplex gRNA strategy in Y. lipolytica.
Not available
S-EPMC5910576 | biostudies-literature
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