Sort   by:  
 Page size 
no omics definedTranscription profiling of human colonic cells before and after induction of the transcription factor SOX9 by doxycycline
Transcriptome of modified HT29Cl.16E colonic cells before and after induction of the transcription factor SOX9 by doxycycline.
ORGANISM(S): Homo sapiens 
2007-05-01 | E-MEXP-859 | biostudies-arrayexpress
TranscriptomicsNon-CpG island promoter hypomethylation and miR-149 regulate the expression of SRPX2 in colorectal cancer
We used Illumina Infinium 27k Human DNA Methylation BeadChip v1.2 to assess genome-wide DNA methylation profiling of normal colon epithelial, adenomas and colorectal adenocarcinomas across approximately 27,000 CpGs in fresh frozen colorectal tissue samples. We found that cancer-associated methylatio...
ORGANISM(S): Homo sapiens 
2013-06-15 | E-GEOD-40055 | biostudies-arrayexpress
Proteomics,MultiomicsmiR-625-3p regulates oxaliplatin resistance by targeting MAP2K6-p38 signaling in human colorectal adenocarcinoma cells
Oxaliplatin (oxPt) resistance in colorectal cancers (CRC) is a major unsolved problem. Consequently, predictive markers and a better understanding of resistance mechanisms are urgently needed. To investigate if the recently identified predictive miR-625-3p is functionally involved in oxPt resistance...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-29 | MSV000080762 | MassIVE
TranscriptomicsGnHR agonist trigger versus hCG trigger in final ovulation induction
The objective of this experiment was to explore differences in follicle transcriptomes in patients having oocyte maturation induced with either a bolus of hCG or a GnRH agonist. Upon oocyte retrieval, mural granuloasa cells and cumulus cells were isolated, allowing for comparison of the follicular t...
ORGANISM(S): Homo sapiens 
2013-06-15 | E-MTAB-1670 | biostudies-arrayexpress
GenomicsThe colon KRAS/BRAF variants detection set - samples
Description not provided
EGAD00001000835 | EGA
GenomicsThe Potential Role of Alu Y in the Development of Resistance to SN38 (Irinotecan) or Oxaliplatin in Colorectal Cancer
Purpose: Irinotecan (SN38) and oxaliplatin are chemotherapeutic agents used in the treatment of colorectal cancer. However, the frequent development of resistance to these drugs represents a considerable challenge in the clinic. Alus as retrotransposons comprise 11% of the human genome. Genomic toxi...
ORGANISM(S): Homo sapiens 
2015-04-01 | E-GEOD-56269 | biostudies-arrayexpress
ProteomicsHeLa proteome of 12,250 protein-coding genes
We developed an optimized multi-shot proteomics workflow based on high-resolution offline high pH reversed-phase peptide separation of high peptide loads collecting many fractions that were in turn analyzed by short online chromatographic separations and fast peptide sequencing using orbitrap tandem...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000081563 | MassIVE
TranscriptomicsNon-coding RNA expression in colorectal cancer
Expression was measured in 113 colorectal cancer samples using a costumized array. Expression was measured in 113 human colorectal cancer samples using a custom-designed array containing 26,910 non-coding RNA features and a set of 6,856 protein-coding genes.
ORGANISM(S): Homo sapiens 
2016-01-12 | E-GEOD-76713 | biostudies-arrayexpress
GenomicsDirect Detection of Early-stage Cancers Using Circulating Tumor DNA
Early detection and intervention are likely to be the most effective means for reducing morbidity and mortality of human cancer. However, development of methods for noninvasive detection of early-stage tumors has remained a challenge. We have developed an approach called targeted error correction se...
EGAS00001002577 | EGA
Genomicsena-DATASET-JHU-SOM-01-09-2017-17:11:13:045-143 - samples
The dataset for Direct Detection of Early-Stage Cancers using Circulating Tumor DNA includes 602 bam files from next-generation sequencing on the Illumina HiSeq2500 or MiSeq. The samples analyzed include cancer cell lines as well as plasma and tissue specimens from healthy individuals and patients ...
EGAD00001003601 | EGA
Sort   by:  
 Page size