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TranscriptomicsTranscription profiling of autumn senescence in populus Leaves
Gene expression profiling in leaves of a free-growing aspen tree (Populus tremula) in Umea in northern Sweden during natural autumn senescence (from August 17 to September 21).
ORGANISM(S): Populus tremula 
2004-03-09 | E-MEXP-93 | biostudies-arrayexpress
TranscriptomicsTranscription profiling time series of Sulfolobus acidocaldarius and Sulfolobus solfataricus after treatment with actinomycin D
Transcription inhibition by actinomycin D. RNA samples extracted at 3, 6, 9, 12, 15 min post actinomycin D. Each cDNA hybridised against reference cDNA from untreated culture.
ORGANISM(S): Sulfolobus solfataricus 
2006-11-08 | E-MEXP-894 | biostudies-arrayexpress
UnknownGlobal analysis of mRNA stability in the archaeon Sulfolobus.
Not available
S-EPMC1794556 | biostudies-literature
TranscriptomicsExpression data from hypervitaminosis A rat diaphyseal bone
Vitamin A is the only known compound that produces spontaneous fractures in rats. In an effort to resolve the molecular mechanism behind this effect, we fed young rats high doses of vitamin A and performed a global transcriptional analysis of diaphyseal bone after one week, i.e. just before the firs...
ORGANISM(S): Rattus norvegicus 
2011-12-21 | E-GEOD-29859 | biostudies-arrayexpress
TranscriptomicsMicroarray gene expression analysis of T-cell prolymphocytic leukemia (T-PLL) patient samples
T-cell prolymphocytic leukemia (T-PLL) is a rare and aggressive neoplasm of mature T-cells with an urgent need for rationally designed therapies to address its notoriously chemo-refractory behavior. To characterize the gene expression profiles, 12 T-PLL MNC samples (>90% tumor cell content) were scr...
ORGANISM(S): Homo sapiens 
2017-09-08 | E-MTAB-5916 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse embryonic stem cells transfected with miR-10a or miR-10a-MUT shows that miR-10a interacts with the 5 prime untranslated region of mRNAs encoding ribosomal proteins and enhances their translation
MicroRNAs (miRNAs) are small RNAs that function as post-transcriptional regulators of gene expression. miRNAs affect a variety of signaling pathways and impaired miRNA regulation may contribute to the development of cancer and other diseases. We show that miRNA miR-10a interacts with the 5' untransl...
ORGANISM(S): Mus musculus 
2008-11-08 | E-MEXP-1375 | biostudies-arrayexpress
ProteomicsFET fusion oncoproteins enrich SWI/SNF complex subtypes and interaction partners
• Abstract: FET fusion oncoproteins, containing the N-terminal of a FET protein (FUS, EWSR1 and TAF15) together with a DNA-binding transcription factor partner, are characteristic for around 20 different sarcomas and leukemias, including myxoid liposarcoma (MLS) and Ewing sarcoma (EWS). FET oncoprot...
ORGANISM(S): Homo sapiens (Human) 
2025-09-22 | PXD047503 | Pride
Myxoid liposarcoma Fet fusion oncoproteins Swi/snf chromatin remodeling complex Quantitative mass spectrometry Ewing sarcoma 
TranscriptomicsTranscription profiling of Camplyobacter jejuni isolates from humans and chickens
This experiment compares C.jejuni isolates from humans and chicken. The samples were collected during a Swedish outbreak. The chicken samples were collected from groceries from the same geographical reagions as the infected humans. The genotypes of the C.jejuni isolates were compared using three dif...
ORGANISM(S): Campylobacter jejuni 
2008-04-08 | E-TABM-460 | biostudies-arrayexpress
TranscriptomicsUmea Lucidea Experiment
The experiment was designed to enable validation of pre-processing and test algorithms. The in-house produced cDNA-array contains 44 clones: 19 clones from mice, 4 clones from Pine (involved in photosynthesis) and 21 artificial clones from the Lucidea Universal ScoreCard (Amersham Bioscienses), wher...
ORGANISM(S): Mus musculus 
2011-05-21 | E-GEOD-29400 | biostudies-arrayexpress
TranscriptomicsGene Copy Number Aberrations are Associated with Survival in Histological Subgroups of Non-Small Cell Lung Cancer (copy number data)
Hypothesis: Non-small cell lung cancer (NSCLC) is characterized by a multitude of genetic aberrations with unknown clinical impact. In this study, we aimed to identify gene copy number changes that correlate with clinical outcome in NSCLC. To maximize the chance to identify clinically relevant event...
ORGANISM(S): Homo sapiens 
2011-11-01 | E-GEOD-28572 | biostudies-arrayexpress
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