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TranscriptomicsTranscriptional targets of Xenopus EBF3 in the presence of Noggin : Untreated animal caps vs. Dexamethasone (DEX) treated animal caps
Transcriptional profiling comparing the genes upregulated or downregulated by active hGR-Xebf3 by treating hormone DEX to those by non-active hGR-Xebf3 in Xenopus animal caps. Three experimental conditions, Noggin and hGR-Xebf3 without DEX treatment (1), Noggin and hGR-Xebf3 with DEX treatment (2), ...
ORGANISM(S): Xenopus laevis 
2011-05-25 | E-GEOD-25734 | biostudies-arrayexpress
TranscriptomicsTranscriptional targets of Xenopus EBF3 in the absence of Noggin : Untreated animal caps vs. Dexamethasone (DEX) treated animal caps
Transcriptional profiling comparing the genes upregulated or downregulated by active hGR-Xebf3 by treating hormone DEX to those by non-active hGR-Xebf3 in Xenopus animal caps. Three experimental conditions, hGR-Xebf3 without DEX treatment (1), hGR-Xebf3 with DEX treatment (2), and hGR with DEX treat...
ORGANISM(S): Xenopus laevis 
2011-05-25 | E-GEOD-27084 | biostudies-arrayexpress
TranscriptomicsXenopus laevis embryos and animal caps: Control vs PouV morpholino
Transcriptional profiling of Xenopus laevis embryos and ectoderm (animal caps) comparing embryos injected with control morpholino with embryos injected with the morpholino mixture PVD2, which knocks down all three Xenopus PouV proteins. Whole embryos (WE) or animal caps (AC) were collected at late b...
ORGANISM(S): Xenopus laevis 
2013-11-12 | E-GEOD-47578 | biostudies-arrayexpress
TranscriptomicsIdentification of Kctd15 target genes in Xenopus animal caps injected with wnt3a and chordin
We aimed to identify genes that are inhibited by Kctd15 overexpression during neural crest (NC) induction. Injection of RNAs encoding Wnt3a and chordin into the embryo followed by animal cap explant culture leads to the induction of NC marker genes as well as additional genes expressed in the neur...
ORGANISM(S): Xenopus laevis 
2015-08-26 | E-GEOD-72391 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of Xenopus laevis animal caps overexpressing MyoD
mRNa encoding for XtMyoD was overexpressed in animal caps and the transcriptional profile of uninjected and injected animal caps was compared.
ORGANISM(S): Xenopus laevis 
2011-06-22 | E-MEXP-3273 | biostudies-arrayexpress
ProteomicsXenopus laevis kidney-induced animal caps nanoLC-MS/MS - Xenopus Ssbp2 is required for embryonic pronephros morphogenesis and terminal differentiation.
The nephron, functional unit of the vertebrate kidney, is specialized in metabolic wastes excretion and body fluids osmoregulation. Given the high evolutionary conservation of gene expression and segmentation patterning between mammalian and amphibian nephrons, the Xenopus laevis pronephric kidney o...
ORGANISM(S): Xenopus laevis (African clawed frog) 
2023-10-24 | PXD041761 | Pride
Xenopus Animal caps Lhx1 Ssbp2 Kidney 
TranscriptomicsInfluenza A virus preferentially snatches non-coding RNA caps
Influenza A virus (IAV) lacks the enzyme for adding 5’ caps to its RNAs, and thus snatches the 5’ ends of host capped RNAs to prime transcription. Neither the preference of the host RNA sequences snatched, nor the effect of “cap-snatching” on host processes has been completely defined. Previ...
ORGANISM(S): Homo sapiens 
2015-11-23 | E-GEOD-67493 | biostudies-arrayexpress
GenomicsGenome wide analysis of Suv4-20h1/2 depleted animal caps [dataset2]
Genome wide analysis of Suv4-20h1/2 depleted animal caps [dataset2]
PRJNA677829 | ENA
GenomicsGenome wide analysis of Suv4-20h1/2 depleted animal caps [dataset1]
Genome wide analysis of Suv4-20h1/2 depleted animal caps [dataset1]
PRJNA677830 | ENA
ProteomicsCcdc78 and Ccdc33 AP-MS from Xenopus laevis animal caps.
Anti GFP AP-MS of GFP-fusions for Ccdc78 and Ccdc33 from excised cultured Xenopus animal caps rich in multi-ciliated cells. Control samples were anti-GFP pull-downs from similar tissue expressing only GFP. Samples were prepared by in-gel digest, and there are 3 injections for each sample (labeled ...
ORGANISM(S): Xenopus Laevis (ncbitaxon:8355) 
2025-01-10 | MSV000096822 | MassIVE
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