Aoki V V - OmicsDI

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Unknown (160)
Proteomics (16)
Metabolomics (12)
Transcriptomics (10)
Genomics (3)

Organisms

Homo sapiens (15)
Mus musculus (10)
Paralichthys olivaceus (1)
Oryza sativa (1)
Rattus norvegicus (1)
Escherichia coli str. K-12 substr. W3110 (1)

Repository

pride (13)
MetaboLights (12)
biostudies-arrayexpress (10)
EGA (3)
jPOST (3)

Tissue

Blood plasma (3)
Liver (3)
Blood platelet (1)
Brain (1)
Embryonic kidney cell line (1)
Kidney (1)
Lung (1)
Placenta (1)
Platelet (1)
Syncytiotrophoblast cell (1)

Disease

Disease free (2)
Obesity (2)
Alzheimer's disease (1)
Chronic myeloid leukemia (1)
Mutational_hotspot (1)
Pancreas adenocarcinoma (1)
Pancreatic cancer (1)

Technology Type

Mass Spectrometry (13)
Mass spectrometry (11)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-dependent acquisition (4)
Shotgun proteomics (4)
Data-independent acquisition (2)
Mass spectrometry assay (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
Liquid Chromatography MS - negative - reverse phase (2)
Agilent Microarray Scanner (1)
Illumina Genome Analyzer IIx (1)
6550 Q-TOF LC-MS Agilent (1)
Exactive (Thermo Scientific) (1)
LTQ Orbitrap Velos (Thermo Scientific) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative (1)

Publication Date

2023 (5)
2017 (4)
2024 (4)
2019 (4)
2026 (4)
2014 (3)
2020 (2)
2015 (2)
2013 (2)
2022 (2)
2018 (2)
2025 (2)
2007 (1)
2021 (1)

CHEBI ID

CHEBI:15971 (3)
CHEBI:16015 (3)
CHEBI:17203 (3)
CHEBI:17295 (3)
CHEBI:17509 (3)
CHEBI:17895 (3)
CHEBI:18050 (3)
CHEBI:139465 (2)
CHEBI:15937 (2)
CHEBI:16027 (2)
CHEBI:16112 (2)
CHEBI:16264 (2)
CHEBI:16349 (2)
CHEBI:16467 (2)
CHEBI:16680 (2)
CHEBI:16778 (2)
CHEBI:16828 (2)
CHEBI:17053 (2)
CHEBI:17196 (2)
CHEBI:17750 (2)
CHEBI:17818 (2)
CHEBI:18019 (2)
CHEBI:18066 (2)
CHEBI:23849 (2)
CHEBI:25106 (2)
CHEBI:28527 (2)
CHEBI:36281 (2)
CHEBI:36615 (2)
CHEBI:66395 (2)
CHEBI:68352 (2)

Metabolite Name

Diterpenoids (2)
L-arginine (2)
L-asparagine (2)
L-aspartic acid (2)
L-citrulline (2)
L-glutamic acid (2)
L-glutamine (2)
L-histidine (2)
L-lysine (2)
L-proline (2)
Macrolides and analogues (2)
S-adenosyl-L-homocysteine (2)
Triterpenoids (2)
(+)-12-methyl myristic acid (1)
(+)-syringaresinol beta-D-glucoside (1)
(1S,3S,4R,5R)-3-{[(2E)-3-(3,4-dihydroxyphenyl)-2-propenoyl]oxy}-1,4,5-trihydroxycyclohexanecarboxylic acid (1)
(2E)-3-[4-(beta-D-Glucopyranosyloxy)-3-methoxyphenyl]acrylic acid (1)
(2E)-N-[2-(3,4-dihydroxyphenyl)ethyl]-3-(3,4-dimethoxyphenyl)acrylamide (1)
(2E,4E,6E,8E,10E)-11-[(4R)-4-hydroxy-2,6,6-trimethylcyclohexen-1-yl]-5,9-dimethylundeca-2,4,6,8,10-pentaenal (1)
(2S,4S)-Pinnatanine (1)
(3E)-1-hydroxy-4-[(1R)-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-buten-2-yl beta-D-glucopyranoside (1)
(3E)-4-[(1S)-1-Hydroxy-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-buten-2-yl beta-D-glucopyranoside (1)
(3R)-3,7-dimethyl-1,6-octadien-3-yl 6-O-alpha-L-arabinopyranosyl-beta-D-glucopyranoside (1)
(3R,5R)-3,4,5-tris{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}-1-hydroxycyclohexane-1-carboxylic acid (1)
(N(omega)-L-arginino)succinic acid (1)
(S,E)-Lyratol propanoate (1)
1,2,4-triazines (1)
1,2-Di-O-palmitoyl-3-O-(6-sulfoquinovopyranosyl)glycerol (1)
1,3,8-trihydroxy-4-methyl-2,7-diprenylxanthone (1)
1,4-benzodiazepines (1)

Study type

Transcription profiling by array (7)
RNA-seq of coding RNA (2)
Animal - One-color microarray (1)

Release Date

2023 (20)
2021 (19)
2022 (15)
2020 (14)
2017 (13)
2025 (13)
2024 (13)
2018 (13)
2015 (8)
2014 (7)
2019 (7)
2016 (6)
2012 (5)
2013 (3)
2026 (3)
2010 (3)
2003 (3)
2007 (1)
2011 (1)
2009 (1)
2008 (1)
2004 (1)

Lab affiliation

Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of British Columbia (1)
Department of Biochemistry and Molecular Biology, Life Sciences Institute, University of British Columbia, Vancouver, British Columbia, Canada (1)
Department of Biochemistry, Medical College of Wisconsin Department of OBGYN, Medical College of Wisconsin (1)
Donnelly CCBR, University of Toronto, Toronto ON M5S 3E1, Canada (1)
Donnelly Centre, Department of Molecular Genetics,Department of Biochemistry,University of Toronto, Ontario, Canada (1)
Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Curitiba, Brazil (1)
Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz), Curitiba, PR, Brazil (1)
Laboratory for Applied Science and Technology in Health, Carlos Chagas Institute, Oswaldo Cruz Foundation (Fiocruz),Curitiba, Brazil (1)
Reader in Centre for Genomics and Computational Biology Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ Tel: +44 (0)20 7882 8266 | Fax: +44 (0)20 7882 3891 | Email: p.cutillas@qmul.ac.uk www.bci.qmul.ac.uk/research/centre-profiles/haemato-oncology.html https://www.bci.qmul.ac.uk/en/staff/item/pedro-cutillas (1)
Research and Innovation Centre, University of Regina, SK S4S OA2, Canada (1)
University of British Columbia Faculty of Medicine Department of Biochemistry and Molecular Biology (1)
University of British Columbia, Faculty of Medicine, Department of Biochemistry and Molecular Biology (1)
Yale Department of Chemistry (1)

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Skewed primary Igκ repertoire and V-J joining in C57BL/6 mice: implications for recombination accessibility and receptor editing.

Not available

S-EPMC3288532 | biostudies-literature

Screening of exosome-derived proteins and their potential as biomarkers to diagnostic and prognostic for pancreatic cancer

This study aimed to investigate the proteomic landscape of plasma exosomes from patients diagnosed with PDAC and IPMN, compared to healthy controls (CT), in order to identify potential biomarkers with prognostic and diagnostic values. Additionally, the study aimed to understand the functional role o...

ORGANISM(S): Homo sapiens (Human)

2023-09-04 | PXD042543 | Pride

Base preference for inosine 3'-riboendonuclease activity of human endonuclease V: implications for cleavage of poly-A tails containing inosine.

Not available

S-EPMC11217400 | biostudies-literature

Metabolite profiling of the fermentation process of yamahai-ginjo-shikomi Japanese sake

Sake is a traditional Japanese alcoholic beverage prepared by multiple parallel fermentation of rice. The fermentation process of yamahai-ginjo-shikomi sake is mainly performed by three microbes, Aspergillus oryzae, Saccharomyces cerevisiae, and Lactobacilli; the levels of various metabolites fluctu...

2018-06-29 | MTBLS451 | MetaboLights

Influence of Step Frequency on the Dynamic Characteristics of Ventilation and Gas Exchange During Sinusoidal Walking in humans.

Not available

S-EPMC9039249 | biostudies-literature

Participation in Negative Capacitance of Diffusion-Controlled Voltammograms of Hemin.

Not available

S-EPMC7675926 | biostudies-literature

Comprehensive analysis of platelet glycoprotein Ibα glycosylation.

Background: Platelet glycoprotein (GP) Ibα is the major ligand-binding subunit of the GPIb-IX-V complex that binds von Willebrand Factor (VWF). GPIbα is heavily glycosylated, and its glycans have been proposed to play key roles in platelet clearance, VWF binding, and as target antigens in immune thr...

ORGANISM(S): Homo sapiens (Human)

2023-02-09 | PXD035030 | Pride

Human Platelets Glycoproteins

Amino acid permease 3 (aap3) coding sequence as a target for Leishmania identification and diagnosis of leishmaniases using high resolution melting analysis.

Not available

S-EPMC6048756 | biostudies-literature

Uncovering the secrets of monoculture yield decline: Trade-offs between leaf and root chemical and physical defence traits in a grasslands experiment

Plant monocultures growing for extended periods face severe losses of productivity. This phenomenon, known as 'yield decline', is often caused by the accumulation of above- and below-ground plant antagonists. The effectiveness of plant defences against antagonists might help explain differences i...

2023-11-03 | MTBLS4286 | MetaboLights

Molecular Characterization of Soybean Pterocarpan 2-Dimethylallyltransferase in Glyceollin Biosynthesis: Local Gene and Whole-Genome Duplications of Prenyltransferase Genes Led to the Structural Diversity of Soybean Prenylated Isoflavonoids.

Not available

S-EPMC5159607 | biostudies-literature

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