Sort   by:  
 Page size 
TranscriptomicsSalmonella wild type and mutant baeR in LB and tungstate
Transcriptional profiling of Salmonella Typhimurium SL1344 wild type and deleted of the response regulator encoding gene baeR grown to OD600=1 in LB alone or in LB supplemented with 20mM of Sodium Tungstate. The goal is to determine Salmonella response to tungstate and to define the BaeR regulated g...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2011-08-29 | E-GEOD-28861 | biostudies-arrayexpress
TranscriptomicsSalmonella wild type and mutant sdiA in LB and 2mM indole
Transcriptional profiling of Salmonella Typhimurium SL1344 wild type and deletion of the sdiA regulator-encoding gene grown to OD600=1 in LB alone or in LB supplemented with 2mM indole. The goal is to determine Salmonella response to indole and to define the SdiA-regulated genes in these conditions....
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2013-01-30 | E-GEOD-36805 | biostudies-arrayexpress
TranscriptomicsSalmonella wild type in LB, 2mM indole until OD1 and 2mM indole for 15 minutes
Transcriptional profiling of Salmonella Typhimurium SL1344 wild type grown to OD600=1 in LB alone or in LB supplemented with 2mM Indole, or with 2mM indole for 15 min (called shock). The goal is to determine Salmonella response to indole at different time points. Different conditions were tested. Th...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2013-01-30 | E-GEOD-39760 | biostudies-arrayexpress
GenomicsChIP-Seq to determine the binding of enhancer binding proteins VnfA1 and VnfA3 grown in presence of vanadium or in iron-only conditions in Azotobacter vinelandii DJ.
The enhancer binding protein VnfA1 of Azotobacter vinelandii has two paralogs as well VnfA2 and VnfA3. This experiment was carried out to compare the binding sites of VnfA1 and VnfA3 under conditions of vanadium availability and its absence. This is important for the regulation of expression of alte...
ORGANISM(S): Azotobacter vinelandii 
2022-06-23 | E-MTAB-11716 | biostudies-arrayexpress
TranscriptomicsDetermination of Transcription Start Sites (TSS) in Azotobacter vinelandii grown with iron, vanadium or molybdenum for 6 hours after nitrogen step-down
This experiment was to determine genome wide qualitative and quantitative differences in transcription starts under conditions of availability of iron or vanadium or molybdenum which act as co-factors for different nitrogenase isoenzymes. In response to availability of the co-factors transcription i...
ORGANISM(S): Azotobacter vinelandii DJ 
2022-06-23 | E-MTAB-11706 | biostudies-arrayexpress
Sort   by:  
 Page size