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ProteomicsARP-T1 is a ciliary protein associated with a novel ciliopathy in inherited basal cell cancer, Bazex-Dupré-Christol Syndrome
The interactors of the protein Arp-T1 were studied in human cells ( keratinocytes)
ORGANISM(S): Homo sapiens (Human) 
2021-05-06 | PXD016557 | Pride
Gel electrophoresis Immunoprecipitation Lc-msms 
ProteomicsSystematic Metaproteomic Mapping of Ex vivo Gut Microbiota Functional Responses to Therapeutic Drugs (2)
Some therapeutic compounds can influence our gut microbiota, but a comprehensive understanding of their impact on microbial systems ecology remains largely unexplored. This study examines the impact of 312 therapeutic compounds on metaproteomes of six ex vivo human gut microbiota, generating 4.6 mil...
ORGANISM(S): human gut metagenome 
2025-08-28 | PXD056930 | Pride
Systems ecology Gut microbiome Metaproteomics Functional response 
TranscriptomicsExpression analysis of N. europaea (ATCC 19718) wildtype and pFur::Kan mutant grown in Fe-replete and Fe-limited media
Investigation of whole genome gene expression level changes in a Nitrosomonas europaea (ATCC 19718) wildtype and pFur::Kan mutant [kanamycin resistance cassette insertion in the promoter region of the fur gene (NE0616)] strains grown in Fe-replete and Fe-limited media. The Nitrosomonas europaea (ATC...
ORGANISM(S): Nitrosomonas europaea ATCC 19718 
2010-06-20 | E-GEOD-18709 | biostudies-arrayexpress
ProteomicsSystematic Metaproteomic Mapping of Ex vivo Gut Microbiota Functional Responses to Therapeutic Drugs (3)
Some therapeutic compounds can influence our gut microbiota, but a comprehensive understanding of their impact on microbial systems ecology remains largely unexplored. This study examines the impact of 312 therapeutic compounds on metaproteomes of six ex vivo human gut microbiota, generating 4.6 mil...
ORGANISM(S): human gut metagenome 
2025-08-28 | PXD056968 | Pride
Gut microbiota Microbiome Drug response Functional redundancy Metaproteomics 
ProteomicsSystematic Metaproteomic Mapping of Ex vivo Gut Microbiota Functional Responses to Therapeutic Drugs (1)
Some therapeutic compounds can influence our gut microbiota, but a comprehensive understanding of their impact on microbial systems ecology remains largely unexplored. This study examines the impact of 312 therapeutic compounds on metaproteomes of six ex vivo human gut microbiota, generating 4.6 mil...
ORGANISM(S): human gut metagenome 
2025-08-28 | PXD056888 | Pride
Gut microbiota Drug response Metaproteomic Lc-ms/ms 
UnknownPhylogenetic analysis of a microbialite-forming microbial mat from a hypersaline lake of the Kiritimati atoll, Central Pacific.
Not available
S-EPMC3677903 | biostudies-literature
UnknownBacterial succession along a sediment porewater gradient at Lake Neusiedl in Austria.
Not available
S-EPMC6717209 | biostudies-literature
UnknownDNA- and RNA-based bacterial communities and geochemical zonation under changing sediment porewater dynamics on the Aldabra Atoll.
Not available
S-EPMC8917147 | biostudies-literature
TranscriptomicsTranscription profiling of E. coli arginine regulon using wild type and argR- strains grown on medium with and without arginine
Analysis of the response to arginine of the Escherichia coli K-12 transcriptome by microarray hybridization and real-time quantitative PCR provides a first coherent quantitative picture of the ArgR-mediated repression of arginine biosynthesis and uptake genes. Transcriptional repression was shown to...
ORGANISM(S): Escherichia coli 
2007-10-24 | E-GEOD-4724 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of H3K27me3 and H3K4me3 deposition in the fie mutant
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Arabidopsis thaliana 
2011-03-28 | E-GEOD-24163 | biostudies-arrayexpress
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