Sort   by:  
 Page size 
ProteomicsASAP – Automated Sonication free Acid assisted Proteomes from cells & FFPE tissues
Formalin-fixed, paraffin-embedded (FFPE) tissues are an invaluable resource for retrospective studies but protein extraction and subsequent sample processing steps have shown to be challenging for mass spectrometry (MS) analysis. Streamlined high-throughput sample preparation workflows are essential...
ORGANISM(S): Homo sapiens (Human) 
2024-05-21 | PXD036910 | Pride
Pediatric tumors Trifluoroacetic acid Ffpe Sonication-free Clinical proteomics 
TranscriptomicsRNA-Seq of control and RNPS1 knockdown with or without RNPS1-RRM domain rescue in HeLa Tet-Off cells
RNPS1 is a splicing regulatory protein and a component of the ASAP/PSAP complex, which is associated with the exon junction complex and modulates alternative splicing. It was previously postulated that the isolated RRM domain of RNPS1 in complex with ASAP/PSAP is able to regulate certain alternative...
ORGANISM(S): Homo sapiens 
2022-06-22 | E-MTAB-10768 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of control and RNPS1 knockdown with or without RNPS1 wildtype or RNPS1-RRM domain rescue in Flp-In T-REx 293 cells
RNPS1 is a splicing regulatory protein and a component of the ASAP/PSAP complex, which is associated with the exon junction complex and modulates alternative splicing. It was previously postulated that the isolated RRM domain of RNPS1 in complex with ASAP/PSAP is able to regulate certain alternative...
ORGANISM(S): Homo sapiens 
2022-05-06 | E-MTAB-10770 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of control, RNPS1 knockdown and rescue in HeLa cells
We report the knockdown and rescue of RNPS1, a component of the ASAP and PSAP complexes and, hence, an auxiliary component of the exon junction complex. The studied conditions show an extensive change in alternative splicing and the cell's transcriptome. For the knockdown, HeLa cells were transfect...
ORGANISM(S): Homo sapiens 
2018-11-01 | E-MTAB-6564 | biostudies-arrayexpress
UnknownASAP─Automated Sonication-Free Acid-Assisted Proteomes─from Cells and FFPE Tissues.
Not available
S-EPMC9933881 | biostudies-literature
UnknownQuantitative Proteomics Reveals a Role for SERINE/ARGININE-Rich 45 in Regulating RNA Metabolism and Modulating Transcriptional Suppression via the ASAP Complex in Arabidopsis thaliana.
Not available
S-EPMC6761909 | biostudies-literature
TranscriptomicsTest dataset for countASAP package: a lightweight easy to use Python package for processing ASAPseq data
A recently developed technique, transposase-accessible chromatin with sequencing (ATAC) with select antigen profiling by sequencing (ASAPseq), provides a combination of chromatin accessibility assessments with measurements of cell- surface marker expression levels. While software exists for the char...
ORGANISM(S): Mus musculus 
2025-10-24 | E-MTAB-15786 | biostudies-arrayexpress
UnknownASAP: a web-based platform for the analysis and interactive visualization of single-cell RNA-seq data.
Not available
S-EPMC5870842 | biostudies-literature
UnknownThe evolutionary neuroscience of musical beat perception: the Action Simulation for Auditory Prediction (ASAP) hypothesis.
Not available
S-EPMC4026735 | biostudies-literature
UnknownASAP 2: a pipeline and web server to analyze marker gene amplicon sequencing data automatically and consistently.
Not available
S-EPMC8740450 | biostudies-literature
Sort   by:  
 Page size