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TranscriptomicsMurine Ba/F3 Cells: Ba/F3 cells expressing wild type JAK2 (WT cells) vs. Ba/F3 cells expressing JAK2 V617F mutant (VF cells)
Transcriptional profiling of transformed Ba/F3 cells by myeloproliferative neoplasm-associated JAK2 V617F mutant comparing control Ba/F3 cells expressing wild type JAK2. Two-condition experiment, WT cells vs. VF cells. One replicate per array.
ORGANISM(S): Mus musculus 
2013-10-31 | E-GEOD-34239 | biostudies-arrayexpress
TranscriptomicsBa/F3 cells expressing ETV6-PDGFRb and FIP1L1-PDGFRa treated or not with Glivec
Gene expression profiles in Ba/F3 cells expressing ETV6-PDGFRB, FIP1L1-PDGFRA or a control vector, treated or not with imatinib (Glivec) Ba/F3 cells expressing FIP1L1-PDGFRA or ETV6-PDGFRB were cultured in the presence or absence of imatinib for 4 hours before RNA extraction followed by hybridizatio...
ORGANISM(S): Mus musculus 
2014-03-21 | E-GEOD-44810 | biostudies-arrayexpress
TranscriptomicsGene expression analysis of Ba/F3-ITD cells treated with DMSO or sorafenib
The aim of the study is to analyse whether the Sorafenib renders FLT3-ITD-positive acute myeloid leukemia (AML) cells more immunogenic . We used Ba/F3-ITD cells as a model cell line to study the effect of Sorafenib on FLT3-ITD-positive AML cells. Ba/F3-ITD cells are murine pro-B cell lines with a st...
ORGANISM(S): Mus musculus 
2018-02-01 | E-MTAB-4487 | biostudies-arrayexpress
GenomicsSPAG9-JAK2 gene expression array in Ba/F3 cells
SPAG9-JAK2 gene expression array in Ba/F3 cells
PRJNA730570 | ENA
TranscriptomicsMurine Ba/F3 Cells: Ba/F3 cells expressing wild type JAK2 (WT cells) vs. Ba/F3 cells expressing JAK2 V617F mutant (VF cells)
Transcriptional profiling of transformed Ba/F3 cells by myeloproliferative neoplasm-associated JAK2 V617F mutant comparing control Ba/F3 cells expressing wild type JAK2.
ORGANISM(S): Mus musculus 
2013-10-31 | GSE34239 | GEO
GenomicsPAX5-KIDINS220 gene expression array in Ba/F3 cells
PAX5-KIDINS220 gene expression array in Ba/F3 cells
PRJNA524868 | ENA
GenomicsETV6::FRK gene expression analysis in Ba/F3 cells by whole transcriptome sequencing
ETV6::FRK gene expression analysis in Ba/F3 cells by whole transcriptome sequencing
PRJNA910526 | ENA
GenomicsSingle cell RNAseq of transformed Ba F3 cells
Ba/F3 cells were transformed after transfection with CRISPR/CAS9 + gRNA vs target gene. Oligoclonal cell population was flow sorted into single cells and processes for RNAseq.
ORGANISM(S): Mouse 
2014-12-09 | E-ERAD-298 | biostudies-arrayexpress
ProteomicsLeukaemic protein tyrosine kinase comparison in Ba/F3 cells
Taking a series of oncogenic protein tyrosine kinases and constitutively expressing them in Ba/F3 cells, proteomic analysis was utilised in order to identify common protein changes.
ORGANISM(S): Mus musculus (Mouse) 
2016-06-03 | PXD001505 | Pride
Lymphoma Shotgun proteomics Itraq Leukaemia 
ProteomicsLabel-free differential proteomics analysis of Ba/F3 expressing WT and mutant R98S RPL10
We recently identified a recurrent mutation in the ribosomal gene RPL10 that results in substitution of residue arginine 98 by a serine (R98S) of the ribosomal protein L10 (RPL10) in the contest of T-cell acute lymphoblastic leukemia (T-ALL). To gain insights into the mechanisms by which the RPL10 R...
ORGANISM(S): Mus musculus (Mouse) 
2017-11-28 | PXD005995 | Pride
Leukemia T-all Ribosomal mutation Rpl10 r98s 
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