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TranscriptomicsIntegrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer
To understand epigenetic changes in the distal regulatory as well as proximal regions, we performed RNA-seq, MBD-seq, and H3K27ac ChIP-seq on gastric tissues and cell lines. mRNA sequencing profiles of normal tissue (n), purified gastric cancer (sc), and cultured gastric cancer cell (dc) were genera...
ORGANISM(S): Homo sapiens 
2016-03-28 | E-GEOD-46597 | biostudies-arrayexpress
GenomicsIntegrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer
To understand epigenetic changes in the distal regulatory as well as proximal regions, we performed RNA-seq, MBD-seq, and H3K27ac ChIP-seq on gastric tissues and cell lines MBD sequencing of normal tissue (n), purified gastric cancer (sc), and cultured gastric cancer cell (dc) were generated by deep...
ORGANISM(S): Homo sapiens 
2016-03-28 | E-GEOD-46595 | biostudies-arrayexpress
UnknownGuanylate-binding proteins induce apoptosis of leukemia cells by regulating MCL-1 and BAK.
Not available
S-EPMC8298518 | biostudies-literature
GenomicsIntegrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer
We performed H3K27ac ChIP-seq data in seven gastric cancer cell lines to investigate the functional significance of epigenetic changes at distal regulatory regions H3K27ac ChIP-seq profiling of gastric cancer cell lines were generated by deep sequencing, in each seven samples, using Illumina GAIIx a...
ORGANISM(S): Homo sapiens 
2016-03-28 | E-GEOD-75595 | biostudies-arrayexpress
ProteomicsCas9 immunoprecipatation-mass spectrometry (IP-MS)
In this study, we conducted liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis to identify Cas9-interacting proteins specific to the autophagic condition.
ORGANISM(S): Homo sapiens (Human) 
2025-03-20 | PXD054207 | Pride
Mass spectrometry Immunoprecipitation Cas9 
UnknownIER3 is a crucial mediator of TAp73β-induced apoptosis in cervical cancer and confers etoposide sensitivity.
Not available
S-EPMC4322356 | biostudies-literature
UnknownEvaluation of drought stress level in Sargent's cherry (Prunus sargentii Rehder) using photosynthesis and chlorophyll fluorescence parameters and proline content analysis.
Not available
S-EPMC10576498 | biostudies-literature
MetabolomicsThe Green Tea Modulates Large Intestinal Microbiome and Exo/Endogenous Metabolome altered through Chronic UVB-exposure (Endogenous assays)
The attenuating effects of green tea supplements (GTS) against the ultraviolet (UV) radiation induced skin damages are distinguished. However, the concomitant effects of GTS on the large intestinal microbiomes and associated metabolomes are largely unclear. Herein, we performed an integrated microbi...
2018-09-14 | MTBLS527 | MetaboLights
UnknownPathological roles of the VEGF/SphK pathway in Niemann-Pick type C neurons.
Not available
S-EPMC4263144 | biostudies-literature
TranscriptomicsThe responses of astrocytes stimulated by extracellular a-synuclein
Abnormal neuronal aggregation of a-synuclein is implicated in the development of Parkinson’s disease. Glial cells also show extensive a-synuclein pathology and are thought to contribute to disease progression. However, the mechanism that produces the glial a-synuclein pathology and the interaction b...
ORGANISM(S): Rattus norvegicus 
2010-01-11 | E-GEOD-11574 | biostudies-arrayexpress
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