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TranscriptomicsTranscription profiling Saccharomyces cerevisiae xylose metabolism
In the present study transcriptome and proteome of recombinant, xylose-utilising S. cerevisiae grown in aerobic batch cultures on xylose were compared with glucose-grown cells both in glucose repressed and derepressed states. The aim was to study at genome-wide level how signalling and carbon catabo...
ORGANISM(S): Saccharomyces cerevisiae 
2008-10-26 | E-GEOD-12890 | biostudies-arrayexpress
TranscriptomicsComparison of vineyard, enological and laboratory yeast transcriptomes at different steps of the fermentation curve
Here we report the massively parallel cDNA sequencing (RNA-seq) analysis performed using high throughput sequencing of four vineyard yeast strains collected from the vineyards of the M-bM-^@M-^\Prosecco di Conegliano-ValdobbiadeneM-bM-^@M-^] (P283 and P301 strains) and Piave AO (Appellation of origi...
ORGANISM(S): Saccharomyces cerevisiae 
2014-03-31 | E-GEOD-44845 | biostudies-arrayexpress
TranscriptomicsComparative genomic hybridization of Saccharomyces boulardii and Saccharomyces cerevisiae to determine genomic differences
A comparative genomic hybridisation experiment using Affymetrix YG-S98 arrays to study the genetic background of S. Boulardii compared to S. Cerevisiae strain BY4743. Background: Saccharomyces boulardii, a yeast that was isolated from fruit in Indochina has been used as a remedy for diarrhoea since ...
ORGANISM(S): Saccharomyces boulardii 
2006-11-10 | E-MAXD-15 | biostudies-arrayexpress
TranscriptomicsLysosomal and phagocytic activity is increased in astrocytes during the progression of amyotrophic lateral sclerosis
The aim of the present study is to combine LCM and microarray analysis to study how astrocytes in the spinal cord of transgenic SOD1 G93A mice and their non-transgenic (NTg) littermates respond to stimuli determined by the presence of the human mutant protein throughout the evolution of the disease ...
ORGANISM(S): Mus musculus 
2015-11-02 | E-GEOD-69166 | biostudies-arrayexpress
TranscriptomicsPhysiological and genomic analysis of Saccharomyces cerevisiae artificial hybrids with improved fermentation performance and mannoprotein release capacity
Yeast mannoproteins contribute to several aspects of wine quality by protecting wine against protein haze, reducing astringency, retaining aroma compounds and stimulating growth of lactic-acid bacteria. The selection of a yeast strain simultaneously overproducing mannoproteins and showing good ferme...
ORGANISM(S): Saccharomyces cerevisiae 
2015-03-30 | E-GEOD-48117 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of yeast isolates at different time points during fermentation
Transcriptome analysis in natural Saccharomyces cerevisiae as function of fermentation stage. Strains used were the reference strain S288C, two (06L3FF02 and 06L6FF20) isolates from the Bairrada wine region, Portugal, three (Lalvin EC-1118, Lalvin ICV D254 and AEB Fermol Rouge) wine yeast obtained c...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-24 | E-MTAB-112 | biostudies-arrayexpress
TranscriptomicsSilva_UMinho_Initial translational response of Saccharomyces cerevisiae to acetic acid-induced apoptosis
The initial translational response of the yeast Saccharomyces cerevisiae in response to acetic acid-induced apoptosis was investigated by microarray profiling of mRNAs contained in polysomal fractions obtained upon 0 (used as control), 15 and 30 minutes of acetic acid treatment. The mRNA fraction th...
ORGANISM(S): Saccharomyces cerevisiae 
2013-02-24 | E-MEXP-3570 | biostudies-arrayexpress
TranscriptomicsBtBs_UNIMIB_The effect of oxygen availability on recombinant protein producing S. cerevisiae
Transcriptional profiling of Saccharomyces cerevisiae strain CEN.PK, either producing the antibody fragment Fab3H6 or non-producing (control), grown in chemostat cultures under different oxygenation conditions
ORGANISM(S): Saccharomyces cerevisiae 
2011-07-29 | E-MEXP-3134 | biostudies-arrayexpress
MetabolomicsFecal microbiota transplantation plus anti-PD-1 immunotherapy in advanced melanoma: a phase I trial

Fecal microbiota transplantation (FMT) represents a potential strategy to overcome resistance to immune checkpoint inhibitors in patients with refractory melanoma; however, the role of FMT in first-line treatment settings has not been evaluated. We conducted a multicenter phase I trial combining ...

2025-02-27 | MTBLS711 | MetaboLights
TranscriptomicsGene expression in kidney following UUO +/- anti-miR-214
Animals were sc dosed with 5mg/kg anti-miR-214 or control anti-miR, had UUO performed and were sacrificed at 7 days. n=4 animals per group, 2 groups
ORGANISM(S): Mus musculus 
2013-11-05 | E-GEOD-48194 | biostudies-arrayexpress
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