Ball J J - OmicsDI

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Unknown (1955)
Transcriptomics (381)
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Homo sapiens (318)
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Repository

biostudies-arrayexpress (406)
pride (79)
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Technology Type

Mass Spectrometry (79)
Shotgun proteomics (47)
Mass spectrometry (24)
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Gel-based experiment (9)
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ABI_SOLID, Illumina HiSeq 2000, Illumina 450K, AB 5500xl Genetic Analyzer, AB 5500 Genetic Analyzer, ILLUMINA (1)
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Instrument Platform

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G2505. Agilent’s Scan Control software v. A.7.01 and Feature Extraction. (1)
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PC (1)
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BGISEQ-500 (1)
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LTQ (1)
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Orbitrap Exploris 480 (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
Xevo G2-S Tof (1)

Publication Date

2015 (55)
2013 (50)
2010 (46)
2014 (40)
2016 (37)
2008 (36)
2012 (34)
2011 (27)
2021 (26)
2025 (24)
2022 (24)
2020 (21)
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2017 (19)
2009 (17)
2026 (16)
2019 (14)
2018 (14)
2007 (14)
2024 (9)
2005 (4)
2006 (3)
2004 (1)

UNIPROT ID/AC

A0A024R563 (1)
A0A024R8H9 (1)
A0A024RAN2 (1)
A0A024RC46 (1)
A0A087WUD1 (1)
A0A087WVZ5 (1)
A0A087WWK8 (1)
A0A087WXI0 (1)
A0A087X1S3 (1)
A0A0A0MR66 (1)
A0A0A0MS51 (1)
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A1L020 (1)
A1L0T0 (1)
A1L188 (1)
A1L3X0 (1)
A1X283 (1)
A1XBS5 (1)
A2BFH1 (1)
A2RRP1 (1)

ENSEMBL ID

ENSG00000147251 (1)
ENSG00000170477 (1)
ENSG00000247315 (1)

CHEBI ID

CHEBI:15741 (11)
CHEBI:27266 (11)
CHEBI:16449 (10)
CHEBI:17822 (10)
CHEBI:26271 (10)
CHEBI:28044 (10)
CHEBI:28300 (10)
CHEBI:15428 (9)
CHEBI:16335 (9)
CHEBI:16811 (9)
CHEBI:22653 (9)
CHEBI:16704 (8)
CHEBI:17234 (8)
CHEBI:18186 (8)
CHEBI:18222 (8)
CHEBI:26986 (8)
CHEBI:27897 (8)
CHEBI:17268 (7)
CHEBI:17750 (7)
CHEBI:18012 (7)
CHEBI:18237 (7)
CHEBI:22660 (7)
CHEBI:25017 (7)
CHEBI:25094 (7)
CHEBI:30744 (7)
CHEBI:30769 (7)
CHEBI:30794 (7)
CHEBI:15756 (6)
CHEBI:16865 (6)
CHEBI:17306 (6)

Metabolite Name

Asparagine (7)
Serine (7)
Valine (7)
Alanine (6)
Glucose (6)
Glutamine (6)
Glycine (6)
Proline (6)
Threonine (6)
Betaine (5)
Isoleucine (5)
Leucine (5)
Phenylalanine (5)
Sucrose (5)
Tyrosine (5)
2-hydroxypyridine (4)
Adenosine (4)
Arginine (4)
Aspartate (4)
Choline (4)
Citrate (4)
Creatine (4)
D-(glycerol 1-phosphate) (4)
Galactonic acid (4)
Lysine (4)
Methionine (4)
Succinate (4)
Tryptophan (4)
Uridine (4)
Xylose (4)

First Public Date

2021 (1)
2020 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France (6)
Department of Animal and Poultry Sciences and the School of Neuroscience, Virginia Tech, Blacksburg, VA, USA (2)
Jiangsu Academy of Agricultural Sciences (2)
Molecular and Cellular Biology, University of Guelph, Canada (2)
University of Edinburgh, Institute of Genetics and Molecular Medicine, Edinburgh, Scotland, United Kingdom, EH4 2XR (2)
1Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, VIC, 3010, Australia 2Murdoch Children’s Research Institute, Melbourne, VIC 3052, Australia 3Victorian Clinical Genetics Services, Murdoch Children’s Research Institute, Melbourne, VIC, 3052, Australia (1)
1Natural Sciences and Engineering, University of South Carolina Upstate, Spartanburg, SC 29303 (1)
ARC Centre of Excellence in Plant Cell Walls School of BioSciences The University of Melbourne Australia (1)
Bioprocess Engeneering, IVT, Otto-von-Guericke University, Magdeburg, Germany (1)
Departament de Bioquímica i Biologia Molecular, Universitat de València. C/ Dr. Moliner 50. 46100 Burjassot, València. Spain (1)
Department of Biochemistry and Biophysics, University of Pennsylvania (1)
Department of Biochemistry and Molecular Biology, Drexel University College of Medicine. Translational Cellular Oncology Program, Sidney Kimmel Cancer Center, Thomas Jefferson University (1)
Department of Biochemistry, Institute of Chemistry, University of São Paulo,São Paulo, SP, Brazil (1)
Department of Biology, University of Konstanz, Universitaetsstrasse 10, 78457 Konstanz (1)
Department of Biomedical Sciences Elson S. Floyd College of Medicine Washington State University Spokane, WA 99202, USA (1)
Department of Biomedicine, Aarhus University, Aarhus, Denmark (1)
Department of Cell and Molecular Pharmacology & Experimental Therapeutics, Bruker-MUSC Center of Excellence, Clinical Glycomics, Medical University of South Carolina, Charleston SC USA (1)
Department of Computing and Control Engineering, University of Chemistry and Technology in Prague, Technická 5, 166 28 Praha 6, Czech Republic (1)
Department of Microbiology & Immunology, 2the Cancer Center, Medical College of Wisconsin Department of Medicine, Medical College of Wisconsin, Milwaukee, WI (1)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada, N1G 2W1 (1)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada, N1G 2W1, 519-824-4120 ext. 52129 (1)
Department of Pharmacology Director of Proteomics Mass Spectrometry Facility (1)
Department of Regenerative Medicine and Cell Biology, Medical University of South Carolina, Charleston, SC, 29407 Department of Neurosurgery, Medical University of South Carolina, Charleston, SC, 29407 (1)
Department of Surgery Hollings Cancer Center (HO 512H) Medical University of South Carolina (1)
Department of Translational Medicine and Physiology, Washington State University, Spokane, WA, USA (1)
Dept. Biochemistry, Cambridge University, UK (1)
Division of Applied Functional Genomics, German Cancer Research Center (DKFZ) and National Center for Tumor Diseases (NCT), NCT Heidelberg, Germany (1)
Donald Danforth Plant Science Center (1)
Faculdade de Ciencias e Tecnologia, Universidade NOVA de Lisboa, Portugal (1)
Forensic Science Research Group, Faculty of Health and Life Sciences, Applied Sciences, Northumbria University, NE1 8ST, Newcastle Upon Tyne, UK (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Study type

Transcription profiling by array (263)
RNA-seq of coding RNA (42)
Comparative genomic hybridization by array (18)
ChIP-seq (16)
Other (11)
RNA-seq of coding RNA from single cells (8)
Methylation profiling by array (6)
Unknown experiment type (4)
Cell line - High-throughput sequencing (4)
Genotyping by array (4)
DNA-seq (4)
RNA-seq of non coding RNA from single cells (2)
ChIP-chip by tiling array (2)
Cell line - One-color microarray (2)
ChIP-chip by array (2)
MicroRNA profiling by array (2)
Cell line - Single-cell sequencing (1)
Animal - One-color microarray (1)
High-throughput sequencing (1)
Human - One-color microarray (1)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
ATAC-seq (1)
ScATAC-seq (1)
Proteomic profiling by array (1)
CUT&RUN (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (246)
2025 (235)
2021 (224)
2023 (216)
2024 (174)
2020 (164)
2019 (123)
2015 (112)
2018 (108)
2016 (90)
2014 (90)
2013 (89)
2017 (81)
2012 (81)
2011 (69)
2010 (69)
2008 (62)
2009 (43)
2026 (34)
2007 (25)
2006 (12)
2005 (3)
2004 (3)
2002 (3)
2000 (3)
2003 (1)
2001 (1)

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TGFBR2-dependent Alterations of Exosomal Cargo in DNA Mismatch Repair-deficient HCT116 Colorectal Cancer Cells

DNA mismatch repair-deficient colorectal tumors (CRC) frequently show coding microsatellite frameshift mutations in the MSI tumor driver Transforming Growth Factor Beta Receptor Type 2 (TGFBR2) leading to cellular alteration of MSI tumor cells [Lee, J., Warnken, U., Schnölzer, M., Gebert, J. & Kopit...

ORGANISM(S): Homo sapiens (Human)

2017-04-07 | PXD005620 | Pride

PCGP BALL-PAX5 - samples

DATA FILES FOR BALL-PAX5

EGAD00001000654 | EGA

Women Are at Higher Risk for Concussions Due to Ball or Equipment Contact in Soccer and Lacrosse.

Not available

S-EPMC7310326 | biostudies-literature

HDX-MS of CHIP wt and K30A mutant

HDX-MS was used to establish that conformational-inhibition-signals extended from the TPR-domain to the U-box of CHIP. This underscores inter-domain allosteric regulation of CHIP by the core molecular chaperones. Defining the chaperone-associated TPR-domain of CHIP as a manager of inter-domain commu...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2015-07-30 | MSV000079205 | MassIVE

RNAseq of A/J mice spiral ganglion derived neurospheres vs differentiated auditory neurons

Sphere-forming progenitor cells can be isolated from the fetal and adult mammalian inner ear and give rise to inner ear specific cell types in vitro. Here, we provide phenotypical and functional characterization of a new pool of auditory progenitors as sustainable source for sphere-derived auditory ...

ORGANISM(S): Mus musculus

2020-08-29 | E-MTAB-9441 | biostudies-arrayexpress

Dropping the Ball? The Welfare of Ball Pythons Traded in the EU and North America.

Not available

S-EPMC7143053 | biostudies-literature

WNT activation and TGFβ-smad inhibition potentiate stemness of mammalian auditory neuroprogenitors for high throughput generation of functional auditory neurons in vitro

We have previously identified and characterized the phoenix auditory neuroprogenitors (ANPGs) as highly proliferative progenitor cells isolated from the A/J mouse cochlea. In the present study, we aimed at identifying signaling pathways responsible for the intrinsic high stemness of phoenix ANPGs. A...

ORGANISM(S): Mus musculus

2022-08-31 | E-MTAB-11869 | biostudies-arrayexpress

Chronic insomnia in the setting of MTHFR polymorphism.

Not available

S-EPMC8974368 | biostudies-literature

Can a Good Break Shot Determine the Game Outcome in 9-Ball?

Not available

S-EPMC8357984 | biostudies-literature

Ball Covariance: A Generic Measure of Dependence in Banach Space.

Not available

S-EPMC7720858 | biostudies-literature

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