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TranscriptomicsHuman epithelial cell response to bacterial signal indole
Indole is a bacterial signal secreted by pathogenic and commensal Escherichia coli in the stationary phase at high concentrations (~600 µM). Prior work from our lab has shown that indole decreases E. coli O157:H7 (EHEC) chemotaxis, motility, attachment to epithelial cells and biofilm formation. How...
ORGANISM(S): Homo sapiens 
2010-05-16 | E-GEOD-14379 | biostudies-arrayexpress
UnknownExpansion of cytochrome P450 and cathepsin genes in the generalist herbivore brown marmorated stink bug.
Not available
S-EPMC5774168 | biostudies-literature
TranscriptomicsChanges in EHEC virulence on exposure to epithelial cell secreted factors
EHEC is a food-borne pathogen that colonizes human GI tract and leads to infection. To understand the process of colonization and to decipher if any factors secreted by intestinal epithelial cells help EHEC during the infection process, we studied expression of EHEC virulence gene expression when ex...
ORGANISM(S): Escherichia coli O157:H7 str. EDL933 
2012-10-04 | E-GEOD-22285 | biostudies-arrayexpress
TranscriptomicsRNA-seq of Sorghum bicolor with drought tolerant genotype grown under drought-stress or no-stress control environment
The present study is expected to reveal differentially expressed genes under drought stress of Sorghum bicolor. The seeds of Sorghum genotype drought tolerant (DT) were grown at 28-32°C day/night temperature with 12/12 h light/dark period in the phytotron glass house. The fully opened uppermost leav...
ORGANISM(S): Sorghum bicolor 
2015-08-15 | E-MTAB-3571 | biostudies-arrayexpress
ModelsBakshi2020 - Truncated minimal model of alternative pathway of complement system
This model is based on the publication: "Mathematical Modelling of Alternative Pathway of Complement System". Suruchi Bakshi, Fraser Cunningham, Eva-Maria Nichols, Marta Biedzka-Sarek, Jessica Neisen, Sebastien Petit-Frere, Christina Bessant, Loveleena Bansal, Lambertus A Peletier, Stefano Zamuner, ...
2024-09-02 | BIOMD0000001016 | BioModels
ModelsBakshi2020 - Minimal model of alternative pathway of complement system
This model is based on the publication: "Mathematical Modelling of Alternative Pathway of Complement System". Suruchi Bakshi, Fraser Cunningham, Eva-Maria Nichols, Marta Biedzka-Sarek, Jessica Neisen, Sebastien Petit-Frere, Christina Bessant, Loveleena Bansal, Lambertus A Peletier, Stefano Zamuner, ...
2024-09-02 | BIOMD0000001017 | BioModels
TranscriptomicsTranscription profiling of E. coli O157:H7 w/t LB-Glu 7 hr biofilm cells with various chemicals
E coli O157H7 (EHEC) wildtype 7 hour biofilm cells studied in LB glucose medium with and without chemicals - Epinephrine, Norepinephrine and Indole. Biofilm cells were cultured from glass wool. Experiment Overall Design: Strain: E coli O157H7 (EHEC) Experiment Overall Design: Medium: LB-Glucose Expe...
ORGANISM(S): Escherichia coli 
2008-06-13 | E-GEOD-5552 | biostudies-arrayexpress
ModelsBakshi2020 - Properdin model of alternative pathway of complement system
This model is based on the publication: "Mathematical Modelling of Alternative Pathway of Complement System". Suruchi Bakshi, Fraser Cunningham, Eva-Maria Nichols, Marta Biedzka-Sarek, Jessica Neisen, Sebastien Petit-Frere, Christina Bessant, Loveleena Bansal, Lambertus A Peletier, Stefano Zamuner, ...
2024-09-02 | BIOMD0000001018 | BioModels
UnknownEffectiveness and safety of SARS-CoV-2 vaccine in Inflammatory Bowel Disease patients: a systematic review, meta-analysis and meta-regression.
Not available
S-EPMC9111455 | biostudies-literature
UnknownRelapse Risk and Safety of Long-Term Tocilizumab Use Among Patients With Giant Cell Arteritis: A Single-Enterprise Cohort Study.
Not available
S-EPMC10543396 | biostudies-literature
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