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TranscriptomicsTranscriptional analysis of oxidative-stressed bean nodules elicited by Rhizobium etli expressing an heterologous globin (VHb)
A wide range of environmental stresses lead to an elevated production of reactive oxygen species (ROS) in plant cells thus resulting in oxidative stress. The biological nitrogen fixation in the legume - Rhizobium symbiosis is at high risk of damage from oxidative stress. Common bean (Phaseolus vulga...
ORGANISM(S): Phaseolus vulgaris 
2016-06-15 | E-GEOD-83324 | biostudies-arrayexpress
TranscriptomicsTranscript Profiling of the Common Bean - Rhizobium Symbiosis under Oxidative Stress
A wide range of environmental stresses lead to an elevated production of reactive oxygen species (ROS) in plant cells thus resulting in oxidative stress. The biological nitrogen fixation in the legume - Rhizobium symbiosis is at high risk of damage from oxidative stress. Common bean (Phaseolus vulga...
ORGANISM(S): Phaseolus vulgaris 
2012-06-30 | E-GEOD-37638 | biostudies-arrayexpress
TranscriptomicsCommon bean (Phaseolus vulgaris) PvTIFY orchestrates global changes in transcript profile response to phosphorus deficiency
TIFY is a large plant-specific transcription factor gene family. A subgroup of TIFY genes named JAZ (Jasmonate-ZIM domain) has been identified as repressors of jasmonate (JA)-regulated transcription in Arabidopsis and other plants. JA signaling is involved in many aspects of plant growth/development...
ORGANISM(S): Phaseolus vulgaris 
2013-02-27 | E-GEOD-40935 | biostudies-arrayexpress
TranscriptomicsInfluence of dietary inclusion of a wet processed faba bean protein concentrate on post-smolt Atlantic salmon (Salmo salar)
In the present study, a faba bean protein isolate (wBPC) with almost ~80 % crude protein produced by a wet process was investigated in feeds for Atlantic salmon in seawater. Four dietary treatments were tested including one treatment with high inclusion of fishmeal (400 g kg-1, named FM) and three t...
ORGANISM(S): Salmo salar 
2016-04-20 | E-MTAB-4661 | biostudies-arrayexpress
TranscriptomicsTranscriptional analysis of physiological pathways in a generalist herbivore: responses to different host plants and plant structures by the cotton bollworm (CBW) Helicoverpa armigera [DifferentHost]
Transcriptional profiling comparing gut tissue from fifth instar larvae exposed to six different diets, namely cotton fruit or boll (B), tobacco flower bud (TFB), bean pod (BP), chick pea fruit (CKPF), pinto bean-based artificial diet (PB) and wheat-based artificial Lepidoptera diet (BIO). The gener...
ORGANISM(S): Helicoverpa armigera 
2011-12-12 | E-GEOD-34346 | biostudies-arrayexpress
TranscriptomicsAir-classified faba bean protein concentrate is efficiently utilized as a dietary protein source by post-smolt Atlantic salmon (Salmo salar)
High-quality sources of protein for the formulation of feeds of carnivorous fish species such as Atlantic salmon are currently being sought. In an earlier screening trial we evaluated for the first time in Atlantic salmon (Salmo salar) the applicability of air-classified faba bean (Vicia faba) prote...
ORGANISM(S): Salmo salar 
2015-08-19 | E-MTAB-3835 | biostudies-arrayexpress
ProteomicsAbsolute proteomic comparison of Rhizobium leguminosarum bv. viceae A34 bacteroids of Pisum sativum and R. leguminosarum bv. phaseoli 4292 bacteroids of Phaseolus vulgaris
We have compared the absolute abundance of bacteroid proteins expressed in pea and common bean root nodules, infected with isogenic strains Rhizobium leguminosarum bv. viceae A34 and R. leguminosarum bv. phaseoli 4292, respectively
ORGANISM(S): Pisum sativum (Garden pea) Rhizobium leguminosarum bv. viciae Rhizobium leguminosarum bv. phaseoli 4292 Phaseolus vulgaris (Kidney bean) (French bean) 
2026-04-27 | PXD058609 | Pride
Rhizobia Bacteroids Nitrogen fixation efficiency 
TranscriptomicsThe response to substitution of soybean with faba bean protein concentrate on hepatic transcriptome of Atlantic salmon (Salmo salar)
The production of carnivorous fish such as Atlantic salmon (Salmo salar) is dependent on the availability of high quality protein required as a sustainable substitute for the formulation of the feeds. Plants have arguably the greatest potential, however a major limitation is associated with the pres...
ORGANISM(S): Salmo salar 
2015-08-20 | E-MTAB-2878 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of Arthrobacter in the phyllosphere
Arthrobacter chlorophenolicus A6 is a 4-chlorophenol degrading soil bacterium with high phyllosphere colonization capacity. Till now the genetic basis for the phyllosphere competency of Arthrobacter or other pollutant-degrading bacteria is uncertain. We investigated global gene expression profile of...
ORGANISM(S): Arthrobacter chlorophenolicus A6 
2013-06-21 | E-GEOD-48198 | biostudies-arrayexpress
ProteomicsThe ALLPreT panel of legume allergen preparations: Optimization of total protein extracts and characterization of allergen composition, IgE-binding- and functional cross-linking properties, for the development of an ‘Allergenicity Prediction Toolbox for novel foods’
A protein-naming framework was established to determine the relative abundance of both allergens and non-allergenic proteins in 13 different legume seed extracts (roasted peanut, unroasted peanut, soybean, sweet blue lupine, winter pea, beluga lentils, chickpea, field bean, white kidney bean, fenugr...
ORGANISM(S): Cicer arietinum (Chickpea) (Garbanzo) Pisum sativum (Garden pea) Trifolium pratense Glycine max Arachis hypogaea (Peanut) Trigonella foenum-graecum Trifolium repens Medicago sativa (Alfalfa) Lupinus angustifolius Phaseolus vulgaris (Kidney bean) (French bean) Vicia faba Lens culinaris 
2026-10-01 | PXD079632 | Pride
Allergenicity assessment Proteomics Allpret Data independent acquisition Mass spectrometry Allergen extracts Legumes Ige Food allergy 
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