Berger Michael M

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Unknown (70)
Transcriptomics (15)
Genomics (8)
Proteomics (5)
Metabolomics (4)
Models (2)

Organisms

Homo sapiens (18)
Mus musculus (5)
Drosophila melanogaster (2)
Fusarium graminearum PH-1 (1)
Aspergillus nidulans (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (16)
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pride (3)
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Mass spectrometry (3)
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Illumina HiSeq 4000 (1)
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CHEBI ID

CHEBI:15428 (2)
CHEBI:15603 (2)
CHEBI:16015 (2)
CHEBI:16643 (2)
CHEBI:16857 (2)
CHEBI:16958 (2)
CHEBI:16977 (2)
CHEBI:17191 (2)
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CHEBI:17895 (2)
CHEBI:18019 (2)
CHEBI:18257 (2)
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CHEBI:131989 (1)

Metabolite Name

1-Hydroxypyrene (1)
2,2',6,6'-tetrachlorobisphenol A (1)
2,4,5-Trichlorophenol (1)
2,4-Dichlorophenoxyacetic acid (1)
2,5-Dichlorophenol (1)
2-Amino-1-methyl-6-phenylimidazo(4,5-b)pyridine (1)
2-Hydroxy-4-methoxybenzophenone (1)
2-Naphthol (1)
2-Phenylphenol (1)
2-isopropyl-4-methyl-6-hydroxypyrimidine (1)
2-tert-Butylphenol (1)
3 Phenoxybenzoic acid (1)
3,5,6-Trichloro-2-pyridinol (1)
3-Aminoisobutanoic acid (1)
3-Benzylidenecamphor (1)
3-Phenanthrol, 3-Hydroxyphenanthrene (1)
4-Hydroxybenzophenone (1)
4-Hydroxyproline (1)
4-Methylbenzophenone (1)
4-Methylbenzylidene camphor (1)
4-Octylphenol (1)
4-Phenylphenol (1)
4-tert-Octylphenol (1)
5-Hydroxyindole-3-acetic acid, 3 TMS, 35.49, 2212 (1)
5-Hydroxymethyl-2-furanoic acid (1)
5-Hydroxymethylfurfural (1)
8-Prenylnaringenin (1)
Acetaminophen (1)
Acetaminophen glucuronide (1)
Acetamiprid (1)

IsPrivate

False (2)

Submitter Keywords

Machine Learning Model (2)
FAIR-AIML (1)

Modelling Approach

Computational model (1)
Random forest procedure (1)

Study type

Transcription profiling by array (8)
Cell line - Two-color microarray (2)
RNA-seq of coding RNA (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Other (1)
DNA-seq (1)

Release Date

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2015 (4)
2012 (4)
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2008 (3)
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2014 (2)
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2019 (2)
2011 (1)
2009 (1)

Lab affiliation

Institute of Pharmaceutical Sciences, Swiss Federal Institute of Technology (ETH) Zurich, 8093 Zurich, Switzerland (1)
The Institute for Medical Research Israel-Canada, The Hebrew University Medical School, Jerusalem, Israel (1)
University of Pennsylvania, Cell and Developmental Biology, Epigenetics Institute (1)

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Metabolic Reprogramming Driven by Ant2 Deficiency Augments T Cell Function and Anti-Tumor Immunity

cell activation demands a significant boost in NAD+ levels, often outpacing the capacity of oxidative phosphorylation (OXPHOS). To explore how T cells manage this metabolic stress, we created T cell-specific ADP/ATP translocase-2 knockout (Ant2-/-) mice. Ant2, which is vital for ADP/ATP exchange bet...

ORGANISM(S): Mus musculus (Mouse)

2025-04-09 | PXD062646 | Pride

Landomycins as glutathione-depleting agents and natural fluorescent probes for cellular Michael adduct-dependent quinone metabolism.

Not available

S-EPMC9814637 | biostudies-literature

Evaluating Cancer of the Central Nervous System Through Next-Generation Sequencing of Cerebrospinal Fluid.

Not available

S-EPMC4981784 | biostudies-literature

Variation in homeodomain DNA-binding revealed by high-resolution analysis of sequence preferences

Most homeodomains are unique within a genome, yet many are highly conserved across vast evolutionary distances, implying strong selection on their precise DNA-binding specificities. We determined the binding preferences of the majority (168) of mouse homeodomains to all possible 8-base sequences, re...

ORGANISM(S): Mus musculus

2010-06-26 | E-GEOD-11239 | biostudies-arrayexpress

Phase II Trial and Correlative Genomic Analysis of Everolimus Plus Bevacizumab in Advanced Non-Clear Cell Renal Cell Carcinoma.

Not available

S-EPMC5791841 | biostudies-literature

Molecular mechanism underlying the regulatory specificity of a Drosophila homeodomain protein that specifies myoblast identity

A subfamily of Drosophila homeodomain (HD) transcription factors (TFs) controls the identities of individual muscle founder cells (FCs). However, the molecular mechanisms by which these TFs generate unique FC genetic programs remain unknown. To investigate this problem, we first applied genome-wide ...

ORGANISM(S): Drosophila melanogaster

2012-01-28 | E-GEOD-35380 | biostudies-arrayexpress

Ado-Trastuzumab Emtansine for Patients With HER2-Mutant Lung Cancers: Results From a Phase II Basket Trial.

Not available

S-EPMC6366814 | biostudies-literature

Alterations in DNA Damage Response and Repair Genes as Potential Marker of Clinical Benefit From PD-1/PD-L1 Blockade in Advanced Urothelial Cancers.

Not available

S-EPMC6366295 | biostudies-literature

T-DM1 Activity in Metastatic Human Epidermal Growth Factor Receptor 2-Positive Breast Cancers That Received Prior Therapy With Trastuzumab and Pertuzumab.

Not available

S-EPMC6075965 | biostudies-literature

Genetic Determinants of Cisplatin Resistance in Patients With Advanced Germ Cell Tumors.