Bernardo D D - OmicsDI

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Unknown (716)
Transcriptomics (53)
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Organisms

Homo sapiens (38)
Mus musculus (21)
Drosophila melanogaster (10)
Plasmodium falciparum (2)
Arabidopsis thaliana (2)
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Drosophila simulans (1)
Entamoeba histolytica (1)

Repository

biostudies-arrayexpress (56)
pride (12)
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Tissue

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Disease

Spinal cord (2)
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Technology Type

Mass Spectrometry (12)
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SWATH MS (2)
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Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Q Exactive HF (5)
Illumina HiSeq 4000 (3)
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Illumina HiSeq 2000 (1)
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6520 Q-TOF LC/MS (Agilent) (1)
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Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2010 (11)
2020 (9)
2012 (8)
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CHEBI ID

CHEBI:15756 (2)
CHEBI:30769 (2)
CHEBI:107736 (1)
CHEBI:111762 (1)
CHEBI:115196 (1)
CHEBI:124959 (1)
CHEBI:133086 (1)
CHEBI:135939 (1)
CHEBI:137790 (1)
CHEBI:137889 (1)
CHEBI:138375 (1)
CHEBI:144643 (1)
CHEBI:145334 (1)
CHEBI:15354 (1)
CHEBI:15603 (1)
CHEBI:15724 (1)
CHEBI:15741 (1)
CHEBI:15815 (1)
CHEBI:16020 (1)
CHEBI:16199 (1)
CHEBI:16207 (1)
CHEBI:16347 (1)
CHEBI:16414 (1)
CHEBI:16533 (1)
CHEBI:16643 (1)
CHEBI:166518 (1)
CHEBI:16737 (1)
CHEBI:167852 (1)
CHEBI:16813 (1)
CHEBI:16814 (1)

Metabolite Name

Azithromycin (2)
Bis(2-ethylhexyl) adipate (2)
Creatine (2)
Creatinine (2)
Fluconazole (2)
Glycerophosphocholine (2)
Hypoxanthine (2)
Irbesartan (2)
L-Leucine (2)
Levofloxacin (2)
Linezolid (2)
Linoleoylcarnitine (2)
Lopinavir (2)
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Stachydrine (2)
Telmisartan (2)
(+)-.alpha.-tocopherol (1)
(+)-catechin (1)
(+)-isocorydine (1)
(-)-.alpha.-kainic acid (1)
(-)-epigallocatechin (1)
(-)-myrtenol (1)
(2e,4e)-hexa-2,4-dienoic acid (1)
(2e,4e,12z)-n-(2-methylpropyl)octadeca-2,4,12-trienamide (1)
(3-Carboxypropyl)trimethylammonium cation (1)
(3.beta.,5.alpha.)-4,4-dimethylcholesta-8,14,24-trien-3-ol (1)
(4r)-4-((1r,3s,5s,7r,9s,10s,12s,13r,14s,17r)-1,3,7,12-tetrahydroxy-10,13-dimethylhexadecahydro-1h-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(r)-butyrylcarnitine (1)

First Public Date

2020 (1)

Study type

Transcription profiling by array (42)
Human - High-throughput sequencing (3)
RNA-seq of coding RNA (3)
ChIP-seq (2)
RNA-seq of coding RNA from single cells (2)
RNAi profiling by array (1)
Comparative genomic hybridization by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2022 (100)
2021 (96)
2024 (80)
2025 (76)
2023 (76)
2019 (53)
2020 (51)
2014 (32)
2018 (32)
2017 (31)
2016 (31)
2015 (26)
2026 (21)
2013 (17)
2012 (15)
2010 (15)
2011 (8)
2008 (7)
2009 (4)
2000 (1)

Lab affiliation

Keele University (2)
Analytical Chemistry Lab, Istituto Italiano di Tecnologia, Via Morego 30, 16163 Genova, Italy (1)
CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France (1)
Center for Research in Agricultural Genomics (CRAG), Spain (1)
Hospital Universitario de La Princesa, Instituto de Investigación Sanitaria Princesa (IIS-Princesa), Universidad Autónoma de Madrid (UAM), and Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas (CIBEREHD), Madrid. Spain (1)
Institute of Innate Immunity Biomedical Center, 1OG011, University Hospitals, University of Bonn Venusberg-Campus 1, 53127 Bonn, Germany (1)
Institute of Innate Immunity, University Hospitals, Medical Faculty, University of Bonn, Bonn, Germany (1)
Leibniz Institute on Aging – Fritz Lipmann Institute (FLI) Beutenbergstrasse 11 07745 Jena, Germany (1)
Leibniz Institute on Aging - Fritz Lipmann Institute, Jena, Germany (1)
Ludwig Institute for Cancer Research Department of Oncology, University hospital of Lausanne, Switzerland (1)
Telethon Institute of Genetics and Medicine (TIGEM) (1)

Tags

xref:EuropePMC:PMC7341570 (1)

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Fine scale genetic mapping of a Hybrid Male Sterility factor between Drosophila simulans and D. mauritiana

see publication, arrays from 4 sterile genotypes containing homozygous segments with a Hybrid Male Sterility factor and 1 fertile strain in which the region is a Drosophila simulans and D. mauritiana heterozygous Dye swaps, loop design.

ORGANISM(S): Drosophila melanogaster

2011-03-07 | E-GEOD-25339 | biostudies-arrayexpress

D. simulans with variable Y chromosomes

Y chromosome from different Drosophila simulans were introgressed into the same genetic background. Strains showing distinct sex-ratio distortion were clustered according to the ratio of males and females observed in the progeny. Strains showing disproportionally high number of female flies in the p...

ORGANISM(S): Drosophila simulans

2014-02-01 | E-GEOD-43665 | biostudies-arrayexpress

Vitamin D Insufficiency and Cognitive Function Trajectories in Older Adults: The Rancho Bernardo Study.

Not available

S-EPMC5954988 | biostudies-literature

Bernardo mesoderm differentiation

Transcriptional profiling of hESCs in chemically-defined culture media compared to hESCs differentiated for 36h in the additional presence of FGF, LY294002 and either BMP or ActivinA.

ORGANISM(S): Homo sapiens

2011-08-24 | E-MTAB-464 | biostudies-arrayexpress

Vitamin D supplementation and disease activity in patients with immune-mediated rheumatic diseases: A systematic review and meta-analysis.

Not available

S-EPMC5466211 | biostudies-literature

Lifetime physical activity and late-life cognitive function: the Rancho Bernardo study.

Not available

S-EPMC6424376 | biostudies-literature

Physical Activity and Trajectories of Cognitive Change in Community-Dwelling Older Adults: The Rancho Bernardo Study.

Not available

S-EPMC7286204 | biostudies-literature

Unraveling the evolutionary scenario of the hobo element in populations of Drosophila melanogaster and D. simulans in South America using the TPE repeats as markers.