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ProteomicsChemical and Random Additive Noise Elimination (CRANE) - case_study - multicenter_dataset
The effectiveness of the novel electrospray ionisation - liquid chromatography mass spectrometry (ESI-LC-MS) data de-noising technique, CRANE, is demonstrated by denoising the MS1 and all the MS2 windows of the multicentre, data-independent acquisi-tion (DIA) MS dataset from Navarro, et al. (2016).
ORGANISM(S): Homo sapiens (Human) Escherichia coli Saccharomyces cerevisiae (Baker's yeast) 
2021-07-26 | PXD020529 | Pride
Lc-msms Random noise Chemical noise Denoise Baseline noise Dia 
ProteomicsHigh productivity in hybrid-poplar trees without isoprene emission to the atmosphere
The use of hybrid-poplar tree plantations as a source for biofuels and biomass production in temperate regions of the Northern Hemisphere has also, unintentionally, increased forest isoprene emissions to the atmosphere. The consequences of increased isoprene emissions include higher rates of troposp...
ORGANISM(S): Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) 
2020-01-13 | PXD013252 | Pride
Lc-msms Poplar Isoprene 
UnknownEvaluation of methotrexate Pharmacogenomic variation to predict acute neurotoxicity in children with acute lymphoblastic leukemia.
Not available
S-EPMC11806518 | biostudies-literature
UnknownILAE neuroimaging task force highlight: MRI detection of early life epilepsy caused by focal cortical dysplasia.
Not available
S-EPMC12353584 | biostudies-literature
TranscriptomicsGenome-wide analysis of the function of Tlx in regulating mouse brain glioma gene expression
Analysis of the function of Tlx in regulating brain tumor stem cells (BTSCs) at the gene expression level. Based on our knowledge, we know that Tlx is specifically expressed in the neural stem cells in mouse brain. It also functionally regulates neurogenesis during the postnatal stages. The hypothes...
ORGANISM(S): Mus musculus 
2013-04-17 | E-GEOD-46125 | biostudies-arrayexpress
GenomicsEpstein-Barr Virus oncoprotein super-enhancers control B cell growth
Super-enhancers are principal determinants of cell transcription, development, phenotype, and oncogenesis, not yet implicated in host-pathogen interactions. We found four Epstein-Barr virus (EBV) oncoproteins and five EBV-activated NF-M-oM-^AM-+B subunits co-occupying thousand of enhancer sites in E...
ORGANISM(S): Homo sapiens 
2014-11-01 | E-GEOD-62912 | biostudies-arrayexpress
UnknownDataset of a retrospective multicenter cohort study on characteristics of immune checkpoint inhibitor-induced encephalitis and comparison with HSV-1 and anti-LGI1 encephalitis.
Not available
S-EPMC9679487 | biostudies-literature
UnknownAdolescent maturation of cortical excitation-inhibition balance based on individualized biophysical network modeling.
Not available
S-EPMC11213014 | biostudies-literature
UnknownThe diversity and evolution of pollination systems in large plant clades: Apocynaceae as a case study.
Not available
S-EPMC6344220 | biostudies-literature
UnknownDeep learning enhanced ALPS reveals genetic and environmental factors of brain glymphatic function.
Not available
S-EPMC12878677 | biostudies-literature
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