Biodiscovery - OmicsDI

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Unknown (1169)
Transcriptomics (703)
Genomics (143)
Metabolomics (37)
Proteomics (16)

Organisms

Homo sapiens (195)
Mus musculus (119)
Arabidopsis thaliana (32)
Saccharomyces cerevisiae (28)
Escherichia coli (28)
Rattus norvegicus (17)
synthetic construct (16)
Oncorhynchus mykiss (15)
Campylobacter jejuni (14)
Sinorhizobium meliloti (13)
Oncorhynchus nerka (10)
Bos taurus (8)
Gallus gallus (8)
Salmo salar (8)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (7)
Fundulus heteroclitus (6)
Picea engelmannii x Picea glauca (5)
Mycobacterium avium subsp. paratuberculosis (5)
Populus trichocarpa x Populus deltoides (5)
Streptomyces coelicolor (5)
Candida albicans (5)
Ursus americanus (4)
Rhodococcus jostii RHA1 (4)
Pinctada maxima (4)
Gossypium hirsutum (4)
Lepeophtheirus salmonis (4)
Canis lupus familiaris (4)
Sphingobium sp. SYK-6 (3)
Rhodopseudomonas palustris (3)
Streptomyces griseus subsp. griseus NBRC 13350 (3)

Organisms

Homo sapiens (42)
Escherichia coli (13)
Mus musculus (7)
Cicer arietinum (6)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (5)
Crotalus helleri (4)
Campylobacter jejuni (4)
Lactiplantibacillus plantarum (4)
Oncorhynchus mykiss (3)
Arabidopsis thaliana (3)
Gossypium hirsutum (3)
Rattus norvegicus (3)
Saccharomyces cerevisiae (3)
Rhodopseudomonas palustris (2)
Medicago truncatula (2)
Salmo salar (2)
Lactiplantibacillus plantarum WCFS1 (1)
Rossellomorea sp. H39__3 (1)
Picea engelmannii x Picea glauca (1)
Lens culinaris subsp. culinaris (1)
Azotobacter sp. CWF10 (1)
Simmondsia chinensis (1)
Nitrosomonas europaea (1)
Nippostrongylus brasiliensis (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Ricinus communis (1)
Apis mellifera (1)
Canis lupus familiaris (1)
Mycobacterium tuberculosis (1)
Staphylococcus aureus (1)

Repository

biostudies-arrayexpress (686)
ENA (138)
GNPS (33)
geo (23)
pride (15)
MetaboLights (4)
MassIVE (1)

Tissue

Venom (1)
Prostate gland (1)
Neural cell (1)
Brain (1)
HeLa cell (1)
Leaf (1)
Hepatocyte (1)
Epithelial cell (1)
Colon (1)
Cell culture (1)

Disease

Squamous Cell Carcinoma (2)
Pseudomonas aeruginosa rsmA mutant infected (1)
Non-small cell lung cancer xenograft tumor (1)
Hepatomegaly (1)
Chronic gastritis (1)
No lesions (1)
Challenged with Pieris rapae larvae (1)
MFC II (1)
No local recurrence (1)
Triple negative breast cancer (1)
Bronchioloalveolar carcinoma of lung (1)
Breast carcinoma (invasive ductal) (1)
Fibrosis (1)
Reference (1)
Hypertensive (1)
5 days post MHV infection (1)
Non infected (1)
H9N2 infected (1)
Normal (1)
Drug dependence (1)
Prostate adenocarcinoma (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (15)
Shotgun proteomics (6)
Bottom-up proteomics (5)
Mass spectrometry (4)
Top-down proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (2)
NMR spectroscopy (1)
Gel-based experiment (1)

Instrument Platform

6540 Q-TOF LC/MS (32)
ScanArray 4000 [PerkinElmer] (8)
Axon- GenePix4000B (4)
Other (3)
Liquid Chromatography MS - positive - reverse phase (3)
ScanArray scanning hardware (2)
G2565AA DNA microarray scanner [Agilent] (2)
Generation III Array Scanner [Amersham] (2)
Scanning hardware (2)
LTQ (2)
Infors-HT Labfors chemostat (1)
Covaris M220 (1)
GeneChipR Hybridization Oven 645, GeneChip Fluidics Station 450 (1)
GeneChipR Scanner 3000 (1)
GenePix 4000A [Axon Instruments] (1)
418 [Affymetrix] (1)
6540 Q-TOF LC/MS|1002789 (1)
TimsTOF (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2010 (170)
2012 (101)
2013 (85)
2011 (79)
2014 (65)
2009 (46)
2008 (41)
2015 (37)
2007 (32)
2006 (25)
2016 (13)
2004 (9)
2005 (5)
2020 (4)
2023 (3)
2018 (3)
2017 (3)
2021 (3)
2022 (3)
2019 (2)
2026 (1)

CHEBI ID

CHEBI:145171 (1)
CHEBI:145172 (1)
CHEBI:145167 (1)
CHEBI:145166 (1)
CHEBI:145165 (1)
CHEBI:145164 (1)
CHEBI:145163 (1)
CHEBI:145162 (1)
CHEBI:145161 (1)
CHEBI:145160 (1)
CHEBI:145157 (1)
CHEBI:145156 (1)
CHEBI:145155 (1)
CHEBI:144083 (1)
CHEBI:144084 (1)
CHEBI:144085 (1)
CHEBI:65995 (1)
CHEBI:144086 (1)
CHEBI:144087 (1)
CHEBI:144088 (1)
CHEBI:145170 (1)
CHEBI:145158 (1)
CHEBI:183072 (1)
CHEBI:183071 (1)
CHEBI:183070 (1)
CHEBI:183069 (1)
CHEBI:183068 (1)
CHEBI:183067 (1)
CHEBI:183066 (1)
CHEBI:183065 (1)

Metabolite Name

Maitotoxin 3 (1)
Gambierone (1)
13-desmethylspirolide C (1)
Azaspiracid 34 (1)
Azaspiracid 33 (1)
Azaspiracid 26 (1)
Azaspiracid 10 (1)
Azaspiracid 9 (1)
Azaspiracid 8 (1)
Azaspiracid 7 (1)
Azaspiracid 6 (1)
Azaspiracid 1 (1)
E-Isohalidrysone A (1)
Z-Isohalidrysone A (1)
E-Halidrysone A (1)
Z-Halidrysone A (1)
Spongotine A (1)
Bromodeoxytopsentin (1)
Bromotopsentin (1)
Panicein F2 (1)
Panicein F1 (1)
Panicein D (1)
Panicein C (1)
Panicein B3 (1)
Panicein B2 (1)
Panicein A hydroquinone (1)
Panicein A (1)
Azaspiracid 2 (1)
Azaspiracid 4 (1)
Azaspiracid 5 (1)

First Public Date

2014 (78)
2022 (12)
2025 (9)
2023 (7)
2020 (7)
2024 (6)
2013 (5)
2019 (4)
2026 (3)
2021 (3)
2018 (2)
2017 (1)
2015 (1)

Classification

bacteria (25)

Modification

15.994915 (2)
57.021464 (2)

Study type

Transcription profiling by array (564)
Comparative genomic hybridization by array (59)
Unknown experiment type (27)
Other (12)
MicroRNA profiling by array (8)
Genotyping by array (7)
ChIP-chip by tiling array (3)
Animal - One-color microarray (1)
ChIP-seq (1)
DNA-seq (1)
RNA-seq of coding RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2010 (175)
2023 (164)
2021 (157)
2022 (151)
2025 (124)
2020 (121)
2012 (114)
2013 (103)
2024 (101)
2014 (98)
2011 (84)
2015 (70)
2019 (63)
2016 (57)
2009 (51)
2017 (49)
2018 (48)
2008 (41)
2007 (29)
2006 (23)
2026 (22)
2004 (8)
2005 (1)
2003 (1)

Lab affiliation

Centre for Biodiscovery (4)
NHMRC Principal Research Fellow Editor-in-Chief, Toxicon & Toxicon:X Theme Leader, Australian Research Council Centre of Excellence for Innovations in Peptide & Protein Science Deputy Head, Division of Chemistry & Structural Biology Institute for Molecular Bioscience The University of Queensland (1)
Victoria University of Wellington, New Zealand (1)
Scancell Limited, Biodiscovery Institute, University Park, Science Road, Nottingham NG7 2RD. University of Nottingham, Biodiscovery Institute, Division of Cancer and Stem Cells, University Park, Science Road, Nottingham NG7 2RD. (1)
Institute for Molecular Bioscience - University of Queensland (1)
Translational Medical Sciences, Biodiscovery Institute, University of Nottingham, Nottingham, United Kingdom (1)
BioDiscovery Institute, Department of Biological Sciences, University of North Texas (1)
School of Biological Sciences, Victoria University of Wellington (1)
Victoria University of Wellington (1)
Department of Clinical and Experimental Medicine, Cell Biology, Faculty of Medicine, Linköping University, Linköping, Sweden. Department of Physiology, Ikerbasque, Faculty of Medicine and Nursing, University of the Basque Country UPV/EHU, Spain (1)
Environmental Proteomics Department of Biomedical and Clinical Sciences (BKV) Division of Cell Biology (CELLB), level 13 Medical Faculty Linköping University, SE-581 85 Linköping, Sweden. (1)
School of Biological Sciences Victoria University of Wellington (1)

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Marine Biodiscovery Ireland 2017 Samples

Over the last 60 years, marine natural products have had major economic and commercial importance. The development of a National Marine Biodiscovery Laboratory in Ireland (NMBLI), located at the Marine Institute (Oranmore), aims to strengthen Ireland’s capacity as research leaders in marine biotechn...

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The biodiscovery potential of marine bacteria: an investigation of phylogeny and function.

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Updated Trends on the Biodiscovery of New Marine Natural Products from Invertebrates.

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A Spider Toxin Exemplifies the Promises and Pitfalls of Cell-Free Protein Production for Venom Biodiscovery.

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