Biofuels - OmicsDI

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soil metagenome (4)
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CHEBI ID

CHEBI:17327 (3)
CHEBI:22470 (3)
CHEBI:17992 (3)
CHEBI:17754 (3)
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CHEBI:17306 (2)
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CHEBI:16761 (1)

Metabolite Name

Threonic acid (2)
Phytol (2)
Glyceric acid (2)
Galactose (2)
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Alpha-linolenic acid (2)
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Tryptophan (2)
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Fructose (2)
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Glucose (2)
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First Public Date

2017 (109)
2014 (65)
2013 (32)
2024 (26)
2019 (26)
2023 (17)
2021 (16)
2015 (14)
2022 (13)
2016 (13)
2020 (10)
2018 (10)
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2026 (6)

Modelling Approach

Constraint-based model (5)
Ordinary differential equation model (1)

Lab affiliation

Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (6)
1 School of Chemistry, University of Melbourne, Parkville, Victoria 3010, Australia. 2 Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria 3010, Australia (1)
AG Biochemie der Pflanzen (1)
Associate Professor, Biosciences and Bioengineering Department, IIT Bombay (1)
Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland (1)
Biological Mass Spectrometry Lab,Department of Translational Medicine (DiMeT),Center for Translational Research on Autoimmune & Allergic Diseases - CAAD, University of Piemonte Orientale, Novara (NO),Italy. (1)
Chemical Sciences Division, Oak Ridge National Laboratory (1)
College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, China. (1)
Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel (1)
Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads, 2800 Kgs. Lyngby, Denmark (1)
Department of Chemical and Biological Engineering, University of Sheffield, Mappin Street, Sheffield S1 3JD, United Kingdom (1)
Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220 Aalborg E, Denmark (1)
Department of Ecology, Research Center for Hydrobiology, Jinan University, Guangzhou 510632, People’s Republic of China (1)
EDyP (1)
FATTTLab Department of Biochemistry, 1901 Vine Street, University of Nebraska-Lincoln http://biochem.unl.edu/concetta-c-dirusso (1)
Faculty of Biology, Medicine and Health University of Manchester (1)
Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre Institute of the Royal Netherlands Academy of Arts and Sciences(KNAW) Fungal Molecular Physiology, Utrecht University Utrecht, The Netherlands (1)
Fungal Physiology, CBS-KNAW Fungal Biodiversity Centre Institute of the Royal Netherlands Academy of Arts and Sciences(KNAW) Fungal Molecular Physiology, Utrecht University, The Netherlands (1)
Genome Center of Wisconsin,Department of Chemistry, Department of Biomolecular Chemistry, and DOE Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, WI 53706, USA Morgridge Institute for Research, Madison, WI 53706, USA (1)
Hunan Provincial Key Laboratory of Forestry Biotechnology, Central South University of Forestry and Technology, Changsha, 410004, Hunan, P.R. China (1)
ICGEB (1)
INBIOTEC (1)
Institute for Microbiology University of Greifswald Friedrich-Ludwig-Jahnstr. 15 17489 Greifswald Germany (1)
Institute of Plant Biology and Biotechnology, University of Münster, Münster 48143, Germany (1)
James McGill Professor Director and CEO, BioFuelNet Canada Director, McGill Network for Innovation in Biofuels and Bioproducts Director, Eastern Canadian Oilseeds Development Initiative Plant Science Department, McGill University 21111 Lakeshore Road Ste. Anne de Bellevue, Quebec Canada H9X3V9 (1)
James McGill Professor Director and CEO, BioFuelNet Canada Director, McGill Network for Innovation in Biofuels and Bioproducts Director, Eastern Canadian Oilseeds Development Initiative Plant Science Department, McGill University 21111 Lakeshore Road Ste. Anne de Bellevue, Quebec Canada H9X3V9 Phone: +1 514 398 7866 Fax: +1 514 398 7990 Website: www.mcgill.ca/plant/faculty/smith/ (1)
Joint BioEnergy Institute and Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, 94720, USA (1)
King Mongkut's University of Technology Thonburi (1)
Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. Unidade de Biologia Integrativa, Setor de Genômica e Proteômica, UENF, Campos dos Goytacazes, RJ, Brazil. (1)
National Bioenergy Center (1)

IsPrivate

False (8)

Model Flag

Non Kinetic (4)

Submitter Keywords

FROG (1)

Classification

bacteria (66)
fungi (3)
viruses (1)

Study type

Transcription profiling by array (32)
RNA-seq of coding RNA (14)
Unknown experiment type (1)
MicroRNA profiling by high throughput sequencing (1)
ChIP-seq (1)

Release Date

2018 (345)
2021 (311)
2019 (310)
2020 (290)
2023 (289)
2022 (271)
2016 (259)
2017 (248)
2024 (206)
2014 (171)
2015 (168)
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2013 (148)
2012 (89)
2011 (56)
2010 (31)
2026 (31)
2009 (19)
2008 (7)
2006 (1)

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Effects of fatty acid activation on photosynthetic production of fatty acid-based biofuels in Synechocystis sp. PCC6803.

Not available

S-EPMC3366867 | biostudies-literature

Transcriptome response to alkane biofuels in Saccharomyces cerevisiae: identification of efflux pumps involved in alkane tolerance.

Not available

S-EPMC3717029 | biostudies-literature

Life-cycle assessment of transportation biofuels from hydrothermal liquefaction of forest residues in British Columbia.

Not available

S-EPMC5797420 | biostudies-literature

Transporter engineering for improved tolerance against alkane biofuels in Saccharomyces cerevisiae.

Not available

S-EPMC3598725 | biostudies-literature

Metabolic engineering of Thermoanaerobacterium aotearoense strain SCUT27 for biofuels production from sucrose and molasses.

Not available

S-EPMC10589968 | biostudies-literature

Environmental sustainability of biofuels: a review.

Not available

S-EPMC7735313 | biostudies-literature

Genome replication engineering assisted continuous evolution (GREACE) to improve microbial tolerance for biofuels production.

Not available

S-EPMC3856464 | biostudies-literature

Photosynthetic Carbon Partitioning and Metabolic Regulation in Response to Very-Low and High CO2 in Microchloropsis gaditana NIES 2587

Photosynthetic organisms fix inorganic carbon through carbon capture machinery (CCM) that regulates the assimilation and accumulation of carbon around ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco). However, few constraints that govern the central carbon metabolism are regulated by the ca...

2022-01-14 | MTBLS1778 | MetaboLights

Microalgae biofuels: illuminating the path to a sustainable future amidst challenges and opportunities.

Not available

S-EPMC10804497 | biostudies-literature

Techno-economic Analysis of Sustainable Biofuels for Marine Transportation.

Not available

S-EPMC9730900 | biostudies-literature

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