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TranscriptomicsRNA-seq of the thermophilic biomass-degrading fungus Malbranchea cinnamomea FCH 10.5 when grown on glucose, wheat bran and beechwood xylan
The thermophilic fungus Malbranchea cinnamomea belongs to the order of Onygenales and is a promising source of thermostable, industrially relevant biocatalysts, as it can grow at temperatures of more than 50°C and is able to utilise many different types of plant biomass. Enzymes from M. cinnamomea t...
ORGANISM(S): Malbranchea cinnamomea 
2017-10-27 | E-MTAB-6157 | biostudies-arrayexpress
ProteomicsComparative proteomics of plant biomass degradation by the ascomycete fungus Podospora anserine
The project compares the production of plant biomass degrading enzymes by Podospora anserina during growth on different feed stocks.
ORGANISM(S): Podospora anserina 
2017-02-13 | PXD005170 | Pride
Induction Cellulase Pectinase Plant biomass degradation Xylanase Fungal enzymes 
ProteomicsSecretome analysis of biomass degrading filamentous fungi
Filamentous fungi are widely used in the production of biomass degrading enzymes, e.g. cellulases and pectinases. In order to study the secretome of biomass degrading fungi, proteomics studies were carried out on the extracellular proteins of fungal strains.
ORGANISM(S): Aspergillus Brunneoviolaceus 
2024-01-03 | PXD048232 |
UnknownHigh Potential for Biomass-Degrading Enzymes Revealed by Hot Spring Metagenomics.
Not available
S-EPMC8098120 | biostudies-literature
ProteomicsActivity-based protein profiling of xylan-degrading glycoside hydrolases in Aspergillus secretomes
Plant polysaccharides represent a virtually unlimited feedstock for the generation of biofuels and other commodities. However, the extraordinary recalcitrance of plant polysaccharides towards breakdown necessitates a continued search for enzymes that degrade these materials efficiently under defined...
ORGANISM(S): Aspergillus Niger (ncbitaxon:5061) 
2019-04-24 | MSV000083714 | MassIVE
UnknownEarly-branching gut fungi possess a large, comprehensive array of biomass-degrading enzymes.
Not available
S-EPMC5098331 | biostudies-literature
TranscriptomicsGrowth, enzymatic, and transcriptomic analysis of xyr1 deletion reveals a major regulator of plant biomass-degrading enzymes in Trichoderma harzianum
The regulation of plant biomass degradation by fungi is critical to the carbon cycle, and applications in bioproducts and biocontrol. Trichoderma harzianum is an important plant biomass degrader, enzyme producer, and biocontrol agent, but few putative major transcriptional regulators have been delet...
ORGANISM(S): Trichoderma harzianum 
2023-12-26 | GSE252008 | GEO
TranscriptomicsExpression of lignin-degrading enzymes in soils using targeted microarrays
Microarrays have become established tools for describing microbial systems, however the assessment of expression profiles for environmental microbial communities still presents unique challenges. Notably, the concentration of particular transcripts are likely very dilute relative to the pool of tot...
ORGANISM(S): Phanerochaete chrysosporium 
2010-05-18 | E-GEOD-13977 | biostudies-arrayexpress
GenomicsExpression of lignin-degrading enzymes in soils using targeted microarrays
Expression of lignin-degrading enzymes in soils using targeted microarrays
PRJNA110233 | ENA
UnknownFinding Biomass Degrading Enzymes Through an Activity-Correlated Quantitative Proteomics Platform (ACPP).
Not available
S-EPMC5373979 | biostudies-literature
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