Biswas A A - OmicsDI

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Unknown (2882)
Proteomics (63)
Transcriptomics (20)
Genomics (9)
Metabolomics (4)
Other (1)

Organisms

Homo sapiens (63)
Mus musculus (13)
Acetivibrio thermocellus DSM 1313 (2)
Rattus norvegicus (2)
Pseudomonas syringae (1)
Lolium perenne (1)
Schizosaccharomyces pombe (1)
Acetivibrio thermocellus ATCC 27405 (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Bombyx mori (1)
Escherichia coli (1)

Organisms

Chaetomium globosum (1)
Acetivibrio thermocellus DSM 1313 (1)
Mus musculus (1)

Repository

pride (52)
biostudies-arrayexpress (24)
PanoramaPublic (6)
MetaboLights (4)
PeptideAtlas (4)
ENA (4)
geo (1)
GPMDB (1)
MassIVE (1)

Tissue

Brain (7)
Cell culture (6)
Epithelial cell (6)
Lung (5)
Platelet (4)
Blood plasma (4)
Lymph node (3)
Permanent cell line cell (3)
Fibroblast (2)
Nasal lavage fluid (2)
B cell (1)
Blood cell (1)
Cell suspension culture (1)
Colon epithelial cell (1)
Dendritic cell (1)
Early embryonic cell (1)
Embryo (1)
Embryonic stem cell (1)
Epithelium of esophagus (1)
HeLa cell (1)
Kidney (1)
Liver (1)
MDA-MB-231 cell (1)
Macrophage (1)
Ovary (1)
Pituitary gland (1)
Primary neuron (1)
Retina (1)
Squamous epithelial cell (1)
Synovium (1)

Disease

Brain cancer (4)
COVID-19 (3)
Disease free (2)
Lung cancer (2)
Malignant neoplasm of ovary (2)
Non-small cell lung carcinoma (2)
Not Available (1)
Chronic myeloid leukemia (1)
Colon cancer (1)
Dengue disease (1)
Glioblastoma (1)
Head and neck squamous cell carcinoma (1)
Lung adenocarcinoma (1)
Parkinson's disease (1)
Plasmacytoma (1)
Prostate adenocarcinoma (1)
Rheumatoid arthritis (1)
Tuberculosis (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (52)
Shotgun proteomics (29)
Bottom-up proteomics (9)
Affinity purification coupled with mass spectrometry proteomics (5)
Mass spectrometry (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
SWATH MS (3)
Top-down proteomics (3)
SRM/MRM (2)
Data-dependent acquisition (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Mass spectrometry imaging (1)

Instrument Platform

LTQ Orbitrap (4)
Illumina HiSeq 2500 (2)
Liquid Chromatography MS - positive - reverse phase (2)
NextSeq 550 (1)
Illumina NovaSeq 6000 (1)
Instrument (1)
Orbitrap Eclipse (1)
6540 Q-TOF LC/MS (Agilent) (1)
LTQ Orbitrap Velos (Thermo Scientific) (1)
Liquid Chromatography MS - (1)

Publication Date

2014 (12)
2025 (11)
2022 (10)
2021 (9)
2026 (9)
2023 (6)
2010 (4)
2020 (4)
2018 (3)
2015 (3)
2012 (3)
2024 (3)
2019 (3)
2013 (2)
2017 (2)
2016 (2)
2009 (1)
2006 (1)

UNIPROT ID/AC

A0A0A0MSA7 (4)
A5A3E0 (4)
A6NHL2 (4)
B3KML9 (4)
B4DPR2 (4)
B4E3A4 (4)
D3DPU2 (4)
E7EX29 (4)
H0Y5C6 (4)
H0Y5F3 (4)
H0YDB2 (4)
I3L3D5 (4)
I3L4N8 (4)
K7EKD8 (4)
K7EQ37 (4)
O00264 (4)
O00429 (4)
O00429-4 (4)
O14545 (4)
O14828 (4)
O14950 (4)
O14974 (4)
O14974-4 (4)
O15117 (4)
O15231 (4)
O15231-2 (4)
O15231-5 (4)
O43150 (4)
O43150-2 (4)
O43182 (4)

CHEBI ID

CHEBI:15929 (3)
CHEBI:10106 (2)
CHEBI:10135 (2)
CHEBI:102216 (2)
CHEBI:111173 (2)
CHEBI:116314 (2)
CHEBI:1217 (2)
CHEBI:134485 (2)
CHEBI:134750 (2)
CHEBI:134758 (2)
CHEBI:134827 (2)
CHEBI:134834 (2)
CHEBI:134894 (2)
CHEBI:134934 (2)
CHEBI:135291 (2)
CHEBI:135566 (2)
CHEBI:135932 (2)
CHEBI:137055 (2)
CHEBI:137125 (2)
CHEBI:137268 (2)
CHEBI:1391 (2)
CHEBI:142245 (2)
CHEBI:142683 (2)
CHEBI:143054 (2)
CHEBI:143870 (2)
CHEBI:1458 (2)
CHEBI:156235 (2)
CHEBI:15746 (2)
CHEBI:15756 (2)
CHEBI:1582 (2)

Metabolite Name

(-)-Octanoylcarnitine (2)
(-)-Rhododendrin (2)
(-)-THREO-SPHINGOSINE (2)
(2E)-2-Tridecene-4,6,8-triyn-1-ol (2)
(2E,4E,12Z)-N-Isobutyl-2,4,12-octadecatrienamide (2)
(2R,3R,4S,5S,6R)-2-[(3Z)-hex-3-en-1-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol (2)
(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-(2-phenylethoxy)oxane-3,4,5-triol (2)
(2R,3S,4S,5S,6R)-2-({7-hydroxy-4-[(3Z)-5-hydroxy-3-methylpent-3-en-1-yl]-4a,8,8-trimethyl-3-methylidene-decahydronaphthalen-2-yl}oxy)-6-(hydroxymethyl)oxane-3,4,5-triol (2)
(2S)-2-Amino-8-hydroxyoctanoic acid (2)
(3S)-3-Amino-2-azepanone (2)
(4E)-1,7-Bis(4-hydroxyphenyl)-4-hepten-3-one (2)
(9E,12E)-9,12-Octadecadienoic acid (2)
(9Z)-9-Octadecenamide (2)
(E)-Dacarbazine (2)
(E)-p-coumaric acid (2)
(Z)-3-butylidene-7-hydroxyphthalide (2)
(Z)-Hex-3-enyl benzoate (2)
1,2-Cyclohexadione (2)
1,3,7-Octanetriol (2)
1,4-Anhydro-6-O-dodecanoyl-2,3-bis-O-(2-hydroxyethyl)-D-glucitol (2)
1-(4-methylphenyl)-3,5-diphenylpent-2-ene-1,5-dione (2)
1-Allyl-2,3,4,5-tetramethoxybenzene (2)
1-Heptanethiol (2)
1-Hexadecanoyl-sn-glycero-3-phosphocholine (2)
1-Hexyl-2-methylbenzene (2)
1-Linoleoyl-sn-glycero-3-phosphocholine (2)
1-Monopalmitoylglycerol (2)
1-Oleoyl-rac-glycerol (2)
1-Tetradecylamine (2)
1-[2,6-Dimethyl-4-(2-methyl-2-propanyl)-3,5-dinitrophenyl]ethanone (2)

First Public Date

2026 (2)
2025 (1)
2017 (1)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (4)
ChIP-seq (3)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Unknown experiment type (1)

Release Date

2022 (359)
2025 (356)
2024 (316)
2021 (307)
2023 (302)
2020 (251)
2019 (162)
2018 (154)
2017 (120)
2016 (108)
2015 (82)
2014 (80)
2026 (62)
2013 (54)
2012 (50)
2011 (36)
2010 (30)
2009 (22)
2008 (17)
2006 (8)
2007 (7)
2005 (5)
2004 (5)
2003 (3)
2001 (3)
2000 (3)
1999 (2)
1998 (1)

Lab affiliation

Proteomics Lab, 304, BSBE Department, Indian Institute Technology Bombay, Powai, Mumbai, India-400076 (4)
ICR, Functional Proteomics (2)
Institute of Bioinformatics , International Technology Park, Bangalore, India (2)
1Thoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, MD, USA (1)
Assistant Professor Department of Biochemistry Montreal, Quebec H3G 1Y6 (1)
Associate Professor, Department of Laboratory Medicine, UCSF (1)
Biosciences and Bioengineering, IIT Bombay, India (1)
CSIR IICB (1)
CSIR-Institute of Genomics and Integrative Biology (1)
Chemical Science Division Oak Ridge National Laboratory (1)
Chief Scientist, Professor and Head, Cancer Biology Division CSIR-Central Drug Research Institute & AcSIR, LSS-006 Jankipuram Extension, Lucknow 226031, India (1)
Complex Analysis Group BRIC-Translational Health Science and Technology Institute Dept of Biotechnology, Govt Of India NCR Biotech Science Cluster, 3rd Milestone, Faridabad–Gurugram Expressway, PO box #04, Faridabad- 121001 (Haryana) (1)
Dana Farber Cancer Institute, Boston, MA Harvard Medical School, Boston, MA (1)
Department of Biological Sciences, Bose Institute, Kolkata, West Bengal, 700091, India (1)
Department of Integrated Immunobiology Duke School of Medicine Durham, NC, USA (1)
Department of Integrated Immunobiology Duke School of Medicine Durham, NC, USA (1)
Department of Ophthalmology and Visual Science, University of Michigan, Ann Arbor, MI, USA Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, USA (1)
Dept of pathology, Vision research foundation, Chennai, India (1)
El Bachir Affar, PhD, Professor Department of Medicine, University of Montreal Director of the Cell Signaling and Cancer Research Unit Research Center, Maisonneuve-Rosemont Hospital 5415 Assomption Blvd., Montreal, Quebec, H1T 2M4, CANADA Tel: 514 252-3400 (Ext: 3343) (1)
Functional Proteomics, ICR (1)
Himadri Biswas, Ph. D. Post-doctoral associate, Dept. of Cancer Biology, University of Toledo, Ohio, 43614 (1)
Himadri Biswas, Ph. D. Post-doctoral associate, Dept. of Cancer Biology, University of Toledo, Ohio, 43614, (1)
Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, NY, United States (1)
IICB-Translational Research Unit of Excellence, CSIR-Indian Institute of Chemical Biology,Kolkata, India (1)
Immunology, Moffitt Cancer Center, Tampa, FL (1)
Infectious Diseases and Immunology Division, CSIR – Indian Institute of Chemical Biology, 4, Raja S.C. Mullick Road, Jadavpur, Kolkata-700032, Wet Bengal, India. (1)
Institute for Physiological Chemistry Medizinisch-Theoretisches Zentrum MTZ Technical University Dresden Fiedlerstraße 42 D-01307 Dresden (1)
Institute of Bioinformatics 7th floor, Discoverer building, International Tech Park, Bangalore 560 066 (1)
Max Planck Institute for Infection Biology, Berlin, Germany (1)
Mol & Med. Pharmacology (1)

Tags

xref:PubMed:42441288 (1)

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Transgenic Tobacco Plants Expressing Synthetic Peptides: A Functional and Structural Analysis for Pathogen Resistance

The emergence of multidrug-resistant pathogens poses a significant threat to human health and agriculture. Current antimicrobial strategies against phytopathogens are often ineffective, failing to ensure food security while contributing to environmental pollution. Synthetic antimicrobial peptides (A...

2025-09-25 | MTBLS12255 | MetaboLights

Redescription of Platynaspisflavoguttata (Gorham) (Coleoptera, Coccinellidae) and notes on nomenclature of Platynaspiskapuri Chakraborty & Biswas.

Not available

S-EPMC4092243 | biostudies-literature

Scanning electron microscopy of murine skin ultrathin sections and cultured keratinocytes.

Not available

S-EPMC8379523 | biostudies-literature

A distinct and unique M2 transcriptional program expressed by tumor-associated macrophages

Description This series contains microarrays for tumor associated macrophages (TAMs) purified from 8 week old male C57/BL6N mice, 3 weeks after tumor implantation into the left hind limb. Peritoneal exudates cells (PECs) were also harvested from control C57/BL6N mice. The resulting adherent populati...

ORGANISM(S): Mus musculus

2010-06-10 | E-GEOD-2098 | biostudies-arrayexpress

Human serine/threonine protein kinase ATR LC-MS/MS

ATR is a PI3K-like kinase protein, regulating checkpoint responses to DNA damage and replication stress. Apart from its checkpoint function in the nucleus, ATR actively engage in antiapoptotic role at mitochondria following DNA damage. The different functions of ATR in the nucleus and cytoplasm are ...

ORGANISM(S): Homo sapiens (Human)

2022-08-12 | PXD031385 | Pride

Optimization of Protoplast Isolation and Transformation for a Pilot Study of Genome Editing in Peanut by Targeting the Allergen Gene Ara h 2.

Not available

S-EPMC8775966 | biostudies-literature

Are heavy metals in urban garden soils linked to vulnerable populations? A case study from Guelph, Canada.

Not available

S-EPMC8163869 | biostudies-literature

Optimization of gene editing in cowpea through protoplast transformation and agroinfiltration by targeting the phytoene desaturase gene.

Not available

S-EPMC10075407 | biostudies-literature

Optimization of Prime Editing in Rice, Peanut, Chickpea, and Cowpea Protoplasts by Restoration of GFP Activity

Not available

S-EPMC9456013 | biostudies-literature

Expression data from fission yeast Schizosaccharomyces pombe under nitrosative stress

Nitric oxide being a versatile molecule inside biological systems, from being both a cell signaling molecule to a potent stress agent, has significant effect in the transcriptional response in fission yeast. We have used fission yeast microarrays to identify cellular targets of Nitric Oxide (NO) and...

ORGANISM(S): Schizosaccharomyces pombe

2015-01-30 | E-GEOD-50899 | biostudies-arrayexpress

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2979 Results

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Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

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UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

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