Bora - OmicsDI

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Unknown (420)
Transcriptomics (19)
Proteomics (12)
Genomics (9)
Metabolomics (1)

Organisms

Streptomyces coelicolor (11)
Pseudomonas aeruginosa PA103 (11)
Bartonella quintana JK 31 (11)
Bombyx mori (11)
Onchocerca volvulus (11)
Klebsiella pneumoniae (11)
Musca domestica (11)
Brugia malayi (11)
Schizosaccharomyces pombe (11)
Oryza sativa (11)
Cnidaria (11)
Streptomyces coelicolor A3(2) (11)
Sus scrofa (11)
Human immunodeficiency virus 1 (11)
Oryza sativa Indica Group (11)
Eukaryota (11)
Sinorhizobium meliloti BL225C (11)
Vitis (11)
Sus scrofa domesticus (11)
Ostreococcus tauri (11)
Saccharomyces cerevisiae (11)
Synechocystis sp. PCC 6803 (11)
Populus tremula x Populus alba (11)
Olavius algarvensis Gamma 1 endosymbiont (11)
Vitis vinifera (11)
Homo sapiens (8)
Aedes aegypti (7)
Mus musculus (6)
Acinetobacter baumannii ATCC 17978 (1)
Schistosoma mansoni (1)

Organisms

Homo sapiens (2)
Mus musculus (1)

Repository

biostudies-arrayexpress (19)
pride (11)
ENA (7)
geo (3)
iProX (1)
MetaboLights (1)

Tissue

Embryo (3)
Retina (2)
Brain (2)
Blood plasma (1)

Disease

Retinal disease (1)

Technology Type

Mass Spectrometry (11)
Shotgun proteomics (4)
Data-dependent acquisition (2)
Top-down proteomics (2)
Bottom-up proteomics (2)
Mass spectrometry (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina Genome Analyzer II (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2014 (6)
2024 (4)
2025 (4)
2013 (3)
2012 (3)
2021 (3)
2016 (2)
2008 (2)
2022 (2)
2019 (1)
2010 (1)
2020 (1)
2023 (1)
2015 (1)

Metabolite Name

Adefovir Dipivoxil (Preveon, Hepsera) (1)
Indomethacin (Indocid, Indocin) (1)
MLS001148580-01!6ALPHA,9ALPHA-DIFLUOROPREDNISOLONE 21-ACETATE 17-BUTYRATE (1)
Toremifene Citrate (Fareston, Acapodene) (1)
[(1S,7S,8S,8aR)-8-[2-[(2R,4R)-4-hydroxy-6-oxooxan-2-yl]ethyl]-7-methyl-1,2,3,7,8,8a-hexahydronaphthalen-1-yl] (2S)-2-methylbutanoate (1)
(+)-Cycloolivil 4'-O-¦Â-D-glucopyranoside (1)
(+)-Fasciculic acid B (1)
(+)-Lyoniresinol 2¦Á-O-¦Â-D-glucopyranoside (1)
(-)-Medicocarpin;Medicarpin 3-O-glucoside (1)
(-)-Syringaresinol-4-O-¦Â-D-glucopyranoside (1)
(-)-threo-Iso(homo)2-citrate;(-)-threo-1-Hydroxy-1,2,5-pentanetricarboxylic acid;1-Hydroxypentane-1,2,5-tricarboxylate;threo-(Homo)2-isocitrate (1)
(1)Benzopyrano(5,4,3-cde)(1,3)dioxolo(4,5-h)(1)benzopyran-5,11-dione, 1,2,3-trimethoxy- (1)
(1,3-Dihydroxy-6,8a-dimethyl-3-propan-2-yl-1,2,3a,4,5,8-hexahydroazulen-4-yl) 3,4-dimethoxybenzoate (1)
(10-Hydroxy-8,8-dimethyl-2-oxo-9,10-dihydropyrano[2,3-f]chromen-9-yl) (Z)-2-methylbut-2-enoate (1)
(11E)-11-Octadecenoic acid (1R,2S)-2-[[(Z)-9-hexadecenoyl]oxy]-1-methylpropyl ester (1)
(12Z)-9,10,11,14,15,16,17,18,19,20,21,22-Dodecahydro-5,8-ethenobenzo[20]annulene-2,4,6,24-tetrol (1)
(13S)-13-Ethoxy-1,2-dimethoxy-12-methyl-13H-[1,3]benzodioxolo[5,6-c]phenanthridine (1)
(14E)-11-hydroxy-14-(1H-imidazol-5-ylmethylidene)-2-methoxy-9-(2-methylbut-3-en-2-yl)-2,13,16-triazatetracyclo[7.7.0.01,13.03,8]hexadeca-3,5,7-triene-12,15-dione (1)
(14S)-9,20,21,25-Tetramethoxy-15-methyl-7,23-dioxa-15,30-diazaheptacyclo[22.6.2.23,6.18,12.114,18.027,31.022,33]hexatriaconta-1(30),3(36),4,6(35),8,10,12(34),18,20,22(33),24,26,28,31-tetradecaen-2-one (1)
(19E,21E,23E,25E,27E,29E,31E)-17-[7-(4-aminophenyl)-5-hydroxy-4-methyl-7-oxoheptan-2-yl]-1,3,5,33,37-pentahydroxy-18,36-dimethyl-16,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-9,13,15-trione (1)
(19E,21E,23E,25E,27E,29E,31E)-17-[7-(4-aminophenyl)-5-hydroxy-4-methyl-7-oxoheptan-2-yl]-1,3,5,7,33,37-hexahydroxy-18-methyl-9,13,15-trioxo-16,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-36-carboxylate (1)
(1E,3Z)-buta-1,3-diene-1,2,4-tricarboxylate (1)
(1R)-1-[(4-hydroxyphenyl)methyl]-6-methoxy-2-methyl-1,2,3,4-tetrahydroisoquinolin-2-ium-7-ol (1)
(1R)-1-[[(2S,3R,11bS)-3-ethyl-9,10-dimethoxy-1,2,3,4,5,6,7,11b-octahydrobenzo[a]quinolizin-5-ium-2-yl]methyl]-7-methoxy-1,2,3,4-tetrahydroisoquinolin-2-ium-6-ol (1)
(1R,10R)-5-amino-14-oxido-14-oxo-13,15,18-trioxa-2,4,6,9-tetraza-14lambda5-phosphatetracyclo[8.8.0.03,8.012,17]octadeca-3(8),4-diene-7,11-dione (1)
(1R,14R,24S)-24-Methoxy-5,7,19,21,25-pentaoxa-13-azahexacyclo[12.11.0.02,10.04,8.015,23.018,22]pentacosa-2,4(8),9,15(23),16,18(22)-hexaene (1)
(1R,2'S,3'aS,12S,14S)-2',12-dimethylspiro[13-oxa-2,10,17-triazatetracyclo[10.3.2.02,11.04,9]heptadeca-4,6,8,10-tetraene-14,4'-3,3a-dihydro-2H-imidazo[1,2-a]indole]-1',3,16-trione (1)
(1R,2R,5R,8R,9S,10R,11S)-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylate (1)
(1R,2R,5S,8S,9S,10R,11R,12R,13S)-5,12,13-trihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylate (1)
(1R,2R,6R,11S,13S,14R,21R)-7,19,23-Triazahexacyclo[9.9.1.11,13.12,6.07,21.014,19]tricosane (1)

First Public Date

2024 (3)
2022 (2)
2020 (2)

Study type

Transcription profiling by array (11)
RNA-seq of coding RNA (5)
ChIP-seq (2)

Release Date

2025 (63)
2023 (47)
2022 (43)
2021 (37)
2024 (36)
2020 (35)
2019 (25)
2014 (22)
2017 (20)
2015 (20)
2016 (19)
2018 (19)
2012 (12)
2013 (8)
2026 (8)
2010 (7)
2008 (7)
2011 (6)
2009 (2)
2007 (1)
2006 (1)
2004 (1)

Lab affiliation

Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (3)
University of Illinois Urbana-Champaign, Department of Chemistry (1)
Chemistry Department, University of Illinois Urbana-Champaign (1)
Life Sciences Institute, Zhejiang University, Hangzhou, China. (1)
Biomolecular Mass Spectrometry and Proteomics Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands (1)
Children's Medical Research Institute, Westmead, NSW (1)
Division of Neonatology, Department of Pediatrics, University of Miami Miller School of Medicine and Holtz Children’s Hospital, Jackson Health System, Miami, FL, USA. (1)
Boston Children's Hospital (1)
Biomolecular Mass Spectrometry and Proteomics Bijvoet Center for Biomolecular Research and Utrecht Institute of Pharmaceutical Sciences Padualaan 8 3584 CH Utrecht Utrecht University The Netherlands (1)

Tags

xref:PubMed:36355419 (1)
xref:PubMed:32268485 (1)

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human Bora-interacting proteins

Mass spectrometry analysis of proteins associated with immunopurified Flag-Bora.

ORGANISM(S): Homo sapiens (Human)

2025-09-08 | PXD066562 | Pride

Interaction Bora

Roadside sales activities in a South Pacific Island (Bora-Bora) reveal sustainable strategies for local food supply during a pandemic.

Not available

S-EPMC10138458 | biostudies-literature

'Habitat-associated soundscape' hypothesis tested on several coral reefs within a lagoon (Bora-Bora Island, French Polynesia).

Not available

S-EPMC10108810 | biostudies-literature

Gene Expression Profile of BORA control and overexpressed tumors

PRJNA578874 | ENA

Gene Expression Profile of BORA control and overexpressed tumors

Gene Expression profile of xenograft tumors generated with SK-OV-3 pIND_EV (Empty vector) cells and SK-OV-3 pIND_BORA (Bora overexpressing) cells.

ORGANISM(S): Homo sapiens

2022-10-22 | GSE139244 | GEO

Benchmarking multiple fragmentation methods on an Orbitrap Fusion for top-down phospho-proteoform characterization

Top-down analysis of intact proteins by mass spectrometry provides an ideal platform for comprehensive proteoform characterization, in particular, for the identification and localization of post-translational modifications (PTM) co-occurring on a protein. One of the main bottlenecks in top-down prot...

ORGANISM(S): Homo sapiens (Human)

2015-07-16 | PXD001845 | Pride

Fragmentation Bora Ethcd Top down proteomics Phosphorylation Proteoform Orbitrap fusion

Identification of molecular mechanisms associated with resistance to the neonicotinoid insecticide imidacloprid in the dengue vector Aedes aegypti

This microarray study aimed at comparing constitutive gene expression levels between an Aedes aegypti insecticide-resistant strain (Imida-R) selected at the larval stage with the neonicotinoid insecticide imidacloprid for 10 generations and the parental strain (Bora-Bora) susceptible to all insectic...

ORGANISM(S): Aedes aegypti

2012-03-31 | E-MTAB-616 | biostudies-arrayexpress

Sequencing of mycobacteriophage Bora: Illumina Reads

PRJNA1108264 | ENA

The cAMP-PKA signaling initiates mitosis by phosphorylating Bora.

Not available

S-EPMC12375101 | biostudies-literature

BORA regulates cell proliferation and migration in bladder cancer.

Not available

S-EPMC7339433 | biostudies-literature

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462 Results

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