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Unknown (24)
Transcriptomics (5)
Metabolomics (2)

Organisms

Solanum lycopersicum (4)

Repository

biostudies-arrayexpress (5)
MetaboLights (2)

Technology Type

Mass spectrometry (2)

Instrument Platform

6550 Q-TOF LC-MS Agilent (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2013 (3)
2014 (1)
2008 (1)
2023 (1)
2019 (1)

CHEBI ID

CHEBI:6650 (2)
CHEBI:9630 (2)
CHEBI:142276 (1)
CHEBI:143032 (1)
CHEBI:143033 (1)
CHEBI:143034 (1)
CHEBI:143035 (1)
CHEBI:143036 (1)
CHEBI:143037 (1)
CHEBI:143038 (1)
CHEBI:143039 (1)
CHEBI:143040 (1)
CHEBI:143041 (1)
CHEBI:143042 (1)
CHEBI:143043 (1)
CHEBI:143044 (1)
CHEBI:143045 (1)
CHEBI:143046 (1)
CHEBI:143047 (1)
CHEBI:143048 (1)
CHEBI:143049 (1)
CHEBI:143050 (1)
CHEBI:143051 (1)
CHEBI:143052 (1)
CHEBI:143053 (1)
CHEBI:143054 (1)
CHEBI:143055 (1)
CHEBI:143056 (1)
CHEBI:143057 (1)
CHEBI:143058 (1)

Metabolite Name

Malic acid (2)
(+)-12-methyl myristic acid (1)
(2E,4E,6E,8E,10E)-11-[(4R)-4-hydroxy-2,6,6-trimethylcyclohexen-1-yl]-5,9-dimethylundeca-2,4,6,8,10-pentaenal (1)
(2S,4S)-Pinnatanine (1)
(S,E)-Lyratol propanoate (1)
1,2-Di-O-palmitoyl-3-O-(6-sulfoquinovopyranosyl)glycerol (1)
12'-Apo-b-carotene-3,12'-diol (1)
15:0 Cholesteryl ester (1)
17-(7-hydroxy-6-methylhept-5-en-2-yl)-4,4,10,13,14-pentamethyl-1,2,5,6,12,15,16,17-octahydrocyclopenta[a]phenanthren-3-one (1)
2,2,3-Trimethyltridecanoic acid (1)
2,3-dihydroxypropyl icos-11-enoate (1)
2-[3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,6-dienyl]benzene-1,4-diol (1)
2-palmitoleoyl-glycerol (1)
3-Hydroxy-6,8-dimethoxy-7(11)-eremophilen-12,8-olide (1)
3-Ketoapotrichothecene (1)
3-O-alpha-L-Arabinopyranosylproanthocyanidin A5' (1)
6,7-Dihydro-4-(hydroxymethyl)-2-(p-hydroxyphenethyl)-7-methyl-5H-2-pyrindinium (1)
8-Acetoxy-4-acoren-3-one (1)
Acetyl tryptophan (1)
Acoric acid (1)
Annuionone B (1)
Apigenin 7-[rhamnosyl-(1->2)-galacturonide] (1)
Artemisinic acid (1)
Azadiradionolide (1)
Barringtogenol C (1)
Caffeic acid (1)
Caffeoyl putrescine (1)
Caffeoyl quinic acid (1)
Catechin 7,4'-dimethyl ether (1)
Coumaroyl tyramine (1)

Study type

Transcription profiling by array (3)
RNA-seq of non coding RNA (2)

Release Date

2023 (5)
2021 (5)
2013 (4)
2022 (3)
2014 (2)
2008 (2)
2024 (2)
2025 (1)
2020 (1)
2019 (1)
2018 (1)
2016 (1)
2011 (1)

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Gene expression in three stages of ripening tomato fruit

Gene expression in three stages of ripening tomato fruit (variety Ailsa Craig) was determined with the EUTOM3 Affymetrix array in order to compare with degradrome sequencing data from study GSE42661, treated as RNAseq. three replicates of each stage (MG, mature green; T, turning/breaker; RR, red rip...

ORGANISM(S): Solanum lycopersicum

2013-04-05 | E-GEOD-42783 | biostudies-arrayexpress

Increased Aperiodic Neural Activity During Sleep in Major Depressive Disorder.

Not available

S-EPMC10593867 | biostudies-literature

Transcriptomic profiling of citrus fruit peel tissues reveals fundamental effects of phenylpropanoids and ethylene on induced resistance.

Not available

S-EPMC6640524 | biostudies-literature

Lipopolysaccharides from Ralstonia solanacearum induce a broad metabolomic response in Solanum lycopersicum

Ralstonia solanacearum, one of the most destructive crop pathogens worldwide, causes bacterial wilt disease in a wide range of host plants. The major component of the outer membrane of Gram-negative bacteria, lipopolysaccharides (LPS), has been shown to function as elicitors of plant defense lead...

2023-08-08 | MTBLS7324 | MetaboLights

Transcranial Magnetic Stimulation of the Medial Prefrontal Cortex Decreases Emotional Memory Schemas.

Not available

S-EPMC7232999 | biostudies-literature

Comparison of tomato fruit gene expression data obtained by microarray analysis and by treatment of degradome sequencing data as an RNAseq experiment

This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Solanum lycopersicum

2013-04-05 | E-GEOD-42784 | biostudies-arrayexpress

The effects of daily autobiographical memory training on memory bias, mood and stress resilience in dysphoric individuals.

Not available

S-EPMC9719463 | biostudies-literature

The effect of isolation methods of tomato pollen on the results of metabolic profiling.