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GenomicsEpigenome in brown and white adipose tissue
For comparative epigenomic analysis of brown fat and white fat in mice, H3K27ac and PolII ChIP-seq were performed in each depot. H3K27ac histone modification and PolII transcription profiles in mouse brown and white adipose tissues
ORGANISM(S): Mus musculus 
2015-02-10 | E-GEOD-63964 | biostudies-arrayexpress
TranscriptomicsPostia placenta MAD-698 gene expression in different media
Transscript profiles of Postia placenta grown on different substrates were analyszed. Array design was based on the DoE's Joint Genome Institute's gene models for P. placenta version 1. The research goal is to identtify genes essential for cellulose depolymerization. Keywords: Culture condition com...
ORGANISM(S): Postia placenta 
2010-05-14 | E-GEOD-12540 | biostudies-arrayexpress
TranscriptomicsTranscriptomic profiling of jejunum mucosa of two laying hen strains in response to low dietary Phosphorus
This study investigated changes in gut transcriptome in response to the removal and reduction P (0 and 1 g P/kg feed) during the transition to egg production (at 19 and 24 weeks, before and after the onset of laying) in Lohmann Brown (LB) and Lohmann Selected Leghorn (LSL) chickens. A total of 80 LB...
ORGANISM(S): Gallus gallus 
2024-11-30 | E-MTAB-14040 | biostudies-arrayexpress
MetabolomicsMetabolome analysis reveal key regulatory pathways of feed conversion efficiency of oriental river prawn Macrobrachium nipponense

A total of 445 and 247 differently expressed metabolites (DEMs) were identified in the hepatopancreas and muscle. In addition, 11 KEGG pathways, which mainly include lysine biosynthesis, lysine degradation, aminoacyl-tRNA biosynthesis and purine metabolism, were sign...

2023-02-28 | MTBLS6663 | MetaboLights
TranscriptomicsTranscription profiling of V. vinifera Cabernet sauvignon and V. aestivalis Norton innoculated with Erysiphe necator conidiospores
we analyzed pathogen-induced changes in the transcriptome of Vitis vinifera ‘Cabernet sauvignon’ and Vitis aestivalis ‘Norton’ by conducting a large-scale study to measure transcript abundance at 0, 4, 8, 12, 24, and 48 hours post-treatment in conidiospore- and mock-inoculated leaves using A...
ORGANISM(S): Vitis aestivalis 
2008-06-14 | E-GEOD-6404 | biostudies-arrayexpress
TranscriptomicsGender dependent expression
Gender dependent gene expression in the kidney of 36 day old rats using the Affymetrix GeneChip rat expression set 230 array RAE230A. mixed model ANOVA using log2 transformed signal intensity of PM. Keywords: repeat Three rat strains Mhm, Us and MhmBN were examined. Three arrays were performed for e...
ORGANISM(S): Rattus norvegicus 
2010-06-05 | E-GEOD-3778 | biostudies-arrayexpress
UnknownLenz-Majewski mutations in PTDSS1 affect phosphatidylinositol 4-phosphate metabolism at ER-PM and ER-Golgi junctions.
Not available
S-EPMC4843478 | biostudies-literature
TranscriptomicsExpression data from Human Ishikawa cells treated with Genistein
This study provides a comprehensive evaluation of changes in gene expression during treatment with Genistein in vitro. Ishikawa cells were maintained and grown (to confluency or at a desired cell density between 500,000 - 1 million cells/mL) in DMEM/F-12 Medium (supplemented with 10% Fetal Bovine Se...
ORGANISM(S): Homo sapiens 
2016-07-22 | E-GEOD-71717 | biostudies-arrayexpress
MetabolomicsSearching for metabolic changes in urine headspace composition as an effect of strenuous walking
The present investigation uses proton transfer reaction mass spectrometry (PTR-MS) combined with multivariate and univariate statistical analyses to study potential biomarkers for altered metabolism in urine due to strenuous walking. Urine samples, in concurrence with breath and blood samples, were ...
2016-12-14 | MTBLS164 | MetaboLights
TranscriptomicsGenome-wide expression profile analysis of the Candida glabrata Pdr1 regulon
The ABC-transporters CgCdr1, CgPdh1, and CgSnq2 are known to mediate azole resistance in the pathogenic fungus Candida glabrata. Activating mutations in CgPDR1, a zinc cluster transcription factor, result in constitutive up-regulation of these ABC-transporter genes but to varying degrees. We examine...
ORGANISM(S): Candida glabrata 
2011-02-21 | E-GEOD-24168 | biostudies-arrayexpress
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