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TranscriptomicsScreening Genes related to Bur Lignification Development in field sandbur (Cenchrus pauciflorus Benth.) Based on Full-Length Transcriptome Sequencing
Full-length transcriptome of field sandbur (Cenchrus pauciflorus Benth.) was constructed, and high-throughput sequencing was conducted on mixed samples from four stages (BS1-BS4) of bur development and the root, stem, and leaf organs using the PacBio platform. After quality control and redundancy re...
ORGANISM(S): Cenchrus spinifex 
2026-04-09 | GSE279112 | GEO
TranscriptomicsIdentifying crossover locations in Arabidopsis thaliana wild type and taf4b Col × Bur F2 populations using genotyping-by-sequencing
Genomic DNA from 180 Col/Bur F2 individuals, and 186 taf4b/Bur F2 individuals, was extracted by CTAB and used to generate sequencing libraries as previously described (Ziolkowski et al, 2017 Genes & Dev). Sequencing data was analysed to identify crossovers using the TIGER pipeline as previously desc...
ORGANISM(S): Arabidopsis thaliana 
2019-12-31 | E-MTAB-8099 | biostudies-arrayexpress
TranscriptomicsHigh-resolution analysis of parent-of-origin-allelic expression in Arabidopsis seeds
We report the identification of parent-of-origin specific gene expression in Arabidopsis seeds. F1 hybrid seeds were generated by reciprocally crossing Arabidopsis accessions Col-0 and Bur-0. Seeds were harvested at 4 DAP and total RNA was isolated and analyzed by deep sequencing. Overall identific...
ORGANISM(S): Arabidopsis thaliana 
2011-04-30 | E-GEOD-27292 | biostudies-arrayexpress
GenomicsScreening Genes related to Bur Lignification Development in field sandbur (Cenchrus pauciflorus Benth.) Based on Full-Length Transcriptome Sequencing
Screening Genes related to Bur Lignification Development in field sandbur (Cenchrus pauciflorus Benth.) Based on Full-Length Transcriptome Sequencing
PRJNA1170890 | ENA
UnknownA Randomized Controlled Trial Comparing Er:YAG Laser and Rotary Bur in the Excavation of Caries - Patients' Experiences and the Quality of Composite Restoration.
Not available
S-EPMC5997848 | biostudies-literature
UnknownClimate Change Enhances the Cultivation Potential of <i>Ficus tikoua</i> Bur. in China: Insights from Ensemble Modeling and Niche Analysis.
Not available
S-EPMC12649892 | biostudies-literature
ProteomicsInteractome analysis for Kdm4B
In this project, to identify the proteins interacting with Rpd3 in the Drosophila mushroom body, the tandem affinity-purification(TAP) was performed. After in-solution digestion, the purified protein complex was analyzed by LC-MS/MS analysis using Orbitrap velos pro. PTM analysis was also performed ...
ORGANISM(S): Drosophila Melanogaster (fruit Fly) 
2023-08-12 | PXD039097 | JPOST Repository
UnknownHealth-related quality-of-life evaluation in epidermolysis bullosa: a scoping review protocol.
Not available
S-EPMC12317451 | biostudies-literature
GenomicsMapping and dynamics of regulatory DNA in A. thaliana accessions
We performed DNase-seq on 7-day-old seedlings from four A. thaliana accessions: Bur-0, Tsu-0, Bay-0, Est-1 using INTACT constructs (Deal and Henikoff, Developmental Cell, 2010) driven by the UBQ10 promoter. Chromatin accessibility profiling (Dnase I-seq) of 7-day-old seedlings of A. thaliana accessi...
ORGANISM(S): Arabidopsis thaliana 
2013-12-15 | E-GEOD-53323 | biostudies-arrayexpress
TranscriptomicsNatural variation in Arabidopsis thaliana transcriptomes
A major effort is underway to study the natural variation within the model plant species, Arabidopsis thaliana. Much of this effort is focused on genome resequencing, however the translation of genotype to phenotype will be largely effected through variations within the transcriptomes at the sequen...
ORGANISM(S): Arabidopsis thaliana 
2012-03-12 | E-GEOD-24669 | biostudies-arrayexpress
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