Sort   by:  
 Page size 
TranscriptomicsTranscription profiling of Arabidopsis wild type Col-0 and hsf407 double knock out plants after heat stress
Effect of heat stress on wildtype COL-0 Arabidopsis and hsf4-7 double knock out plants.
ORGANISM(S): Arabidopsis thaliana 
2008-12-31 | E-MEXP-1725 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of heat stress response in Arabidopsis wild type and hsf1x3 double knockout mutant lines
The aim of the expression profiling was to define and to apply criteria that allow discrimination between the effects of heat stress (HS) and HSF-dependent gene expression in Arabidopsis. Therefore we determined and analyzed the expression profiles of wild type (WT) and homozygous hsf1--/hsf3-- doub...
ORGANISM(S): Arabidopsis thaliana 
2004-12-15 | E-MEXP-98 | biostudies-arrayexpress
TranscriptomicsThe novel transcription factor, POPEYE, regulates response to iron deficiency in Arabidopsis roots
ChIP-chip analysis was used to identify direct targets of the transcription factor POPEYE (PYE) ChIP was performed on ProPYE:PYE:GFP plants and on wt plants as a control. The two samples were amplified and hybridized on Agilent arrays. Dye swap was performed for two biological replicates.
ORGANISM(S): Arabidopsis thaliana 
2010-11-22 | E-GEOD-21625 | biostudies-arrayexpress
TranscriptomicsTranscriptional regulation of ROS controls the transition from proliferation to differentiation in the root
We isolated the meristematic and elongation zones of Col-0, upb1-1 mutant and 35S::UPB1-3YFP/upb1-1 plants by micro-dissection and extracted RNA from each section independently. To identify genes that might mediate UPB1 function we conducted a series of microarray experiments. The spatial distributi...
ORGANISM(S): Arabidopsis thaliana 
2010-11-12 | E-GEOD-21876 | biostudies-arrayexpress
TranscriptomicsTranscriptional control of a plant stem cell niche
We used a systems approach to identify target genes and genome wide chromatin binding preferences of the transcription factor WUSCHEL (WUS) in Arabidopsis thaliana. First, we recorded changes in the transcriptome after genetically perturbing the regulatory system of the stem cell niche at various de...
ORGANISM(S): Arabidopsis thaliana 
2010-06-01 | E-MEXP-2499 | biostudies-arrayexpress
TranscriptomicsGenome-wide identification of SCARECROW (SCR) direct targets using a custom Agilent promoter array
ChIP-chip analysis was used to identify direct targets of the transcription factor SCR SCARECROW (SCR) is a key regulatory of radial patterning and stem cell renewal in the primary root. We have shown in previous studies that SCR is a direct transcriptional regulator in Arabidopsis thaliana. With th...
ORGANISM(S): Arabidopsis thaliana 
2011-11-23 | E-GEOD-30104 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of inducible overexpression of Arabidopsis meristem regulators by AlcR / AlcA system in continuous light
Inducible overexpression of Arabidopsis meristem regulators by AlcR / AlcA system. Plants harboring 35S::AlcR/AlcA::GOI (GUS control, LEAFY, SHOOTMERSTEMLESS, WUSCHEL)constructs were grown in continous light for 12 days and induced with 1% Ethanol. After 12h of EtOH treatment, seedlings were dissect...
ORGANISM(S): Arabidopsis thaliana 
2006-01-01 | E-MEXP-432 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of response to photoperiod in Arabidopsis wild type, co, and ft mutant plants
Response to photoperiod in Arabidopsis wildtype, co, and ft mutant plants.
ORGANISM(S): Arabidopsis thaliana 
2005-09-08 | E-TABM-21 | biostudies-arrayexpress
TranscriptomicsWhole embryo RNA-seq of 73 mouse mutant lines and baseline controls from the Mouse Genetics Project (DMDD)
The Deciphering the Mechanisms of Developmental Disorders (DMDD) programme analyses the morphological and molecular phenotypes of embryonic and perinatal lethal mouse mutant lines. Here we show that single whole embryo RNA-seq of 73 mouse mutant lines (>1000 transcriptomes) uncovers transcriptional ...
ORGANISM(S): Mus musculus 
2019-10-31 | E-MTAB-7322 | biostudies-arrayexpress
TranscriptomicsTranscriptional regulation of ROS controls the transition from proliferation to differentiation in the root
ChIP-chip analysis was used to identify direct targets of the transcription factor UPBEAT1 (UPB1) ChIP was performed on ProUPB1:UPB1:GFP plants and on wt plants as a control. The two samples were amplified and hybridized on Agilent arrays. Dye swap was performed for two biological replicates.
ORGANISM(S): Arabidopsis thaliana 
2010-11-12 | E-GEOD-21741 | biostudies-arrayexpress
Sort   by:  
 Page size