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UnknownSingle-cell morphological and transcriptome analysis unveil inhibitors of polyploid giant breast cancer cells in vitro.
Not available
S-EPMC10739852 | biostudies-literature
GenomicsA comprehensive assessment of somatic mutation detection in cancer using whole genome sequencing
As whole genome sequencing for cancer genome analysis becomes a clinical tool, a full understanding of the variables affecting sequencing analysis output is required. Using tumor-normal sample pairs from two different types of cancer, chronic lymphocytic leukemia and medulloblastoma, we conducted a ...
EGAS00001001539 | EGA
UnknownCollagen VI is a fibrosis-associated signal disrupting muscle regeneration across human myopathies
Not available
S-SCDT-10_1038-S44319-026-00834-0 | biostudies-other
TranscriptomicsTranscription profiling by array of the secretome from human myotube and myotube derived vesicles
Human satellite cells were isolated from muscle biopsies and expanded in vitro. Cells were induced to differentiate into branched multinucleated myotubes by serum depletion and were harvested from three independent cultures after 72 hours. Total RNA was isolated, amplified, labelled and hybridised...
ORGANISM(S): Homo sapiens 
2011-04-30 | E-MTAB-423 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of aging muscle progenitors
Genome wide DNA methylation profiling of muscle cells extracted from healthy donors at different ages. The Illumina Infinium Human Methylation 450 BeadChip was used to obtain DNA methylation profiles across > 485,000 methylation sites. The muscle cells were extracted from young adults (18-40 years ...
ORGANISM(S): Homo sapiens 
2015-05-01 | E-GEOD-53302 | biostudies-arrayexpress
GenomicsICGC Benchmark 2 (Medulloblastoma) - samples
Raw fastq files for sequence data generated at 5 sequencing centers from a Medulloblastoma sample and matching blood normal control.
EGAD00001001859 | EGA
GenomicsBASIS_KOREAN_DATASET - samples
A comprehensive characterisation and analysis of human breast cancers through whole-genome sequencing.
EGAD00001001322 | EGA
GenomicsOrigins and functional consequence of somatic mitochondrial DNA mutations
Recent sequencing studies have extensively explored the somatic alterations present in the nuclear genomes of cancers. Although mitochondria control energy metabolism and apoptosis, the origins and impact of cancer-associated mutations in mitochondrial DNA (mtDNA) are unclear. Here, we analysed soma...
EGAS00001000968 | EGA
Genomics560 whole-genome sequenced breast cancers
A comprehensive characterisation and analysis of 560 human breast cancers through genome-wide approaches including genomics, transcriptomics and epigenomics.
EGAS00001001178 | EGA
GenomicsEGAS00001000262-sc-20121031 - samples
A small subsample of EGAD00001000689. Please do not use.
EGAD00001000263 | EGA
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