C57bl6 - OmicsDI

Browse
Submit Data
Databases
API
Help

3458 Results

Show all Save search Copy query

Show results for

Genomics (1446)
Unknown (987)
Transcriptomics (899)
Proteomics (85)
Metabolomics (19)
Methylation profiling (10)
Other (7)
Models (3)

Organisms

Mus musculus (967)
Aerococcus urinae NBRC 15544 = CCUG 36881 (60)
Andropogon gerardi (60)
Bacteria (60)
Bartonella quintana JK 31 (60)
Canis lupus familiaris (60)
Cnidaria (60)
Ectopseudomonas oleovorans CECT 5344 (60)
Ensifer adhaerens (60)
Halictus scabiosae (60)
Human immunodeficiency virus 1 (60)
Mesocricetus auratus (60)
Methylohalobius crimeensis 10Ki (60)
Miscanthus x giganteus (60)
Mus musculus (60)
Panicum virgatum (60)
Pseudomonas aeruginosa SJTD-1 (60)
Rabies virus Nishigahara RCEH (60)
Rattus norvegicus (60)
Rattus rattus (60)
Rhodococcus jostii RHA1 (60)
Rhodopseudomonas palustris (60)
Homo sapiens (18)
Rattus norvegicus (2)
Mus spretus (1)
Mus musculus domesticus (1)
Listeria monocytogenes (1)
synthetic construct (1)
Macaca mulatta (1)
Sus scrofa (1)

Organisms

Mus musculus (1167)
mouse gut metagenome (17)
Mus (9)
Homo sapiens (9)
Mus musculus musculus (7)
Mus musculus domesticus (5)
mouse metagenome (3)
Pseudomonas aeruginosa PA14 (1)
Mus (1)
gut metagenome (1)
feces metagenome (1)
metagenome (1)
Rattus norvegicus (1)

Repository

ENA (1383)
biostudies-arrayexpress (487)
geo (481)
pride (60)
MassIVE (13)
MetaboLights (13)
ExpressionAtlas (12)
GNPS (5)
iProX (5)
jPOST (5)
BioModels (3)
GPMDB (2)
MetabolomicsWorkbench (1)
PanoramaPublic (1)

Tissue

Brain (18)
Liver (9)
Kidney (5)
Skeletal muscle tissue (3)
Dendritic cell (3)
Lung (3)
Cell culture (2)
Heart (2)
Neutrophil (2)
Retina (2)
Skeletal muscle (2)
Tibialis anterior (2)
Differentiated myotube (1)
Lung (1)
Adipose tissue (1)
Blood plasma (1)
Bone matrix (1)
Brown adipose tissue (1)
Cardiomyocyte cell line (1)
Conventional dendritic cell (1)
Embryo (1)
Endothelial cell (1)
Endothelial cell of lymphatic vessel (1)
Epididymal white adipose tissue (1)
Glial cell (1)
HaCaT cell (1)
Hepatocyte (1)
Hippocampus (1)
Lymph node (1)
Lymphatic endothelial cell (1)

Disease

Not Available (2)
Cachexia (2)
Fatty liver disease (2)
Metabolic dysfunction-associated steatotic liver disease (2)
Muscular atrophy (2)
Obesity (2)
Persian gulf syndrome (2)
Pancreatitis (1)
SS2-infected (1)
Normal (1)
Tumor (1)
Fibrosis (1)
Normal (1)
Autosomal recessive limb-girdle muscular dystrophy type 2B (1)
Cardiovascular system disease (1)
Chronic kidney disease (1)
Colon cancer (1)
Cutaneous leishmaniasis (1)
Disease of metabolism (1)
Keratitis (1)
Mental depression (1)
Myopia (1)
Pulmonary hypertension (1)
Type 2 diabetes mellitus (1)
Ureteral obstruction (1)

Technology Type

Mass Spectrometry (61)
Shotgun proteomics (37)
Mass spectrometry (12)
Bottom-up proteomics (9)
Data-dependent acquisition (7)
Gel-based experiment (5)
Top-down proteomics (5)
Data-independent acquisition (2)
HDMSE (2)
SWATH MS (2)
NMR spectroscopy (1)
Mass spectrometry assay (1)
ESI (1)
Affinity purification coupled with mass spectrometry proteomics (1)
All-ion fragmentation (1)

Instrument Platform

Illumina NovaSeq 6000 (17)
NextSeq 500 (15)
Illumina HiSeq 2500 (13)
Illumina HiSeq 2000 (8)
NextSeq 550 (7)
Illumina HiSeq 4000 (7)
NextSeq 2000 (4)
Illumina Genome Analyzer II (3)
Illumina HiSeq 1500 (3)
Illumina HiSeq 3000 (3)
Sony SH800 (2)
Agilent 2100 Bioanalyzer (2)
Axon GenePix 4000B scanning hardware (2)
DNBSEQ-G400 (2)
DNBSEQ G40 (1)
CellRanger v2.1.0 (1)
Eppendorf EpMotion 5073m pipetting robot (1)
PromethION (1)
G2565BA DNA microarray scanner (1)
10x Genomics Chromium (1)
Agilent 2100 Bioanalyzer, Applied Biosystems 7900HT Sequence Detection System, Illumina TruSeq Small RNA Sample Preparation Kit (1)
RNeasy mini Kit, Ribo-Zero Human/Mouse/Rat kit (1)
GeneChip Instrument System (1)
Affymetrix mouse gene 1.0 ST arrays (1)
HP desktop (1)
Fluidics workstation (1)
Qubit 2.0, Agilent 2100 (1)
Fluidigm C1 (1)
Applied Biosystems (1)
Mo-Bio Powersoil extraction kit (1)

Publication Date

2016 (104)
2014 (102)
2025 (68)
2024 (67)
2023 (64)
2022 (61)
2013 (60)
2020 (59)
2012 (50)
2018 (48)
2010 (48)
2015 (45)
2021 (44)
2011 (43)
2008 (38)
2019 (35)
2026 (31)
2017 (31)
2007 (23)
2009 (21)
2006 (16)
2003 (11)
2005 (9)
2004 (5)

CHEBI ID

CHEBI:18186 (4)
CHEBI:16530 (4)
CHEBI:25017 (4)
CHEBI:28044 (4)
CHEBI:17154 (4)
CHEBI:16449 (4)
CHEBI:16919 (4)
CHEBI:24875 (3)
CHEBI:59783 (3)
CHEBI:60645 (3)
CHEBI:26271 (3)
CHEBI:25094 (3)
CHEBI:15753 (3)
CHEBI:16811 (3)
CHEBI:37084 (3)
CHEBI:15428 (3)
CHEBI:17148 (3)
CHEBI:17754 (3)
CHEBI:16958 (3)
CHEBI:6650 (3)
CHEBI:17821 (3)
CHEBI:17568 (3)
CHEBI:15940 (3)
CHEBI:27266 (3)
CHEBI:7916 (3)
CHEBI:17750 (3)
CHEBI:35932 (3)
CHEBI:27480 (3)
CHEBI:17385 (3)
CHEBI:18248 (2)

Metabolite Name

Phosphate (2)
Erythritol (2)
Beta-hydroxyisovalerate (2)
UDP-glucuronate (2)
UDP-glucose (2)
N-acetylneuraminate (2)
4-hydroxyphenylpyruvate (2)
Leucine (2)
Uridine (2)
Tryptophan (2)
Thymine (2)
Serine (2)
Proline (2)
Malate (2)
Lysine (2)
Homocysteine (2)
Cysteine (2)
Citrulline (2)
Aspartate (2)
Asparagine (2)
Phenylalanine (2)
Tyrosine (2)
Urea (2)
Fructose (2)
Threonine (2)
Methionine (2)
Glutamine (2)
Citrate (2)
Alanine (2)
Lactate (2)

First Public Date

2014 (197)
2024 (187)
2025 (166)
2023 (149)
2022 (114)
2020 (102)
2026 (93)
2021 (88)
2018 (76)
2019 (70)
2017 (56)
2016 (33)
2015 (27)
2013 (25)

Modelling Approach

Ordinary differential equation model (3)

Lab affiliation

European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany. (3)
Cornell University (2)
Department of Developmental Neurobiology St. Jude Children's Research Hospital (2)
Institute for Clinical Biochemistry and Pathobiochemistry German Diabetes Center (DDZ) Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf Auf´m Hennekamp 65 40225 Düsseldorf, Germany (2)
1Division of Radiation Health, 2Department of Pharmaceutical Sciences, 3Neurobiology & Developmental Sciences, (1)
Bascom Palmer Eye Institute, Department of Ophthalmology, Miller School of Medicine at University of Miami, Miami, FL 33136, USA +1 (305) 4824103 (1)
Boston University School of Medicine (1)
Cedars-Sinai Medical Center (1)
Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Institute of Pharmacology, 10115 Berlin, Germany (1)
Deparment of Molecular and Cellular Biology University of Guelph Guelph, Ontario, Canada Department of Proteomics and Signal Transduction Max Planck Institute of Biochemistry Martinsried, Germany (1)
Department II of Internal Medicine and Center for Molecular Medicine Cologne, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany CECAD, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany (1)
Department of Biomedical Sciences Cardiac Proteomics Lab University of Copenhagen Denmark (1)
Department of Chemistry and Biochemistry, University of Alabama, USA (1)
Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada, N1H 1N8 (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics & Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, The Netherlands (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, VU University, Amsterdam, The Netherlands (1)
Department of Non-coding RNAs, Institute of Bioorganic Chemistry of the Polish Academy of Sciences, Poznan, Poland (1)
Department of Ophthalmology and Visual Science, University of Michigan, Ann Arbor, MI, USA Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, USA (1)
Department of Pathology and Laboratory Medicine, University of Cincinnati, Cincinnati, OH, USA (1)
Department of Pediatrics, Department of Cell Biology, Neurobiology and Anatomy Medical College of Wisconsin, Milwaukee, WI, United States (1)
Department of Pharmacology, School of Medicine, Tulane University, New Orleans, LA (1)
Department of Pharmacology, University of São Paulo. São Paulo, SP, Brazil. (1)
Department of Radiation Oncology, Weill Cornell Medicine, New York, NY, USA; Department of Pathology, University of Massachusetts Medical School, Worcester, MA, USA. (1)
Dept. Molecular & Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Neuroscience Campus Amsterdam, VU University Amsterdam, Amsterdam, The Netherlands (1)
Division of Cell Signalling and Immunology School of Life Sciences University of Dundee Dundee (1)
Englander Institute of Precision Medicine Professor Radiation Oncology Professor Physiology and Biophysics Weill Cornell Medicine 1300 York Avenue Room E215 New York, NY 10065 tel 646-962-2160 (1)
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany (1)
Faculty Unit of Toxicology, CURML, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland. (1)
Forschungszentrum Juelich ZEA-3 Analytics (1)
Institut National de la Santé et de la Recherche Médicale (INSERM), UMR 1297, Institut des Maladies Métaboliques et Cardiovasculaires, Université de Toulouse, Toulouse, France. (1)

Tags

xref:PubMed:41398052 (7)
xref:PubMed:34558834 (6)
xref:PubMed:38728412 (5)
xref:PubMed:34988395 (5)
xref:PubMed:41339555 (5)
xref:PubMed:31207605 (5)
xref:PubMed:16582906 (5)
xref:PubMed:41996475 (5)
xref:PubMed:39314058 (4)
xref:PubMed:15155529 (4)
xref:PubMed:12819134 (4)
xref:PubMed:38409164 (4)
xref:PubMed:34018016 (3)
xref:PubMed:33752799 (3)
xref:PubMed:33301708 (3)
xref:PubMed:38799057 (3)
xref:PubMed:38363584 (3)
xref:PubMed:31665063 (3)
xref:PubMed:31374856 (3)
xref:PubMed:33879258 (3)
xref:PubMed:36690623 (3)
xref:PubMed:41107595 (3)
xref:PubMed:40027729 (3)
xref:PubMed:32407006 (3)
xref:PubMed:36458588 (2)
xref:PubMed:33293688 (2)
xref:PubMed:39199576 (2)
xref:PubMed:37407508 (2)
xref:PubMed:36586437 (2)
xref:PubMed:36791098 (2)

IsPrivate

False (3)

Classification

bacteria (1)

Modification

Not available (1)

Study type

Transcription profiling by array (316)
RNA-seq of coding RNA (64)
ChIP-seq (22)
RNA-seq of coding RNA from single cells (19)
Transcription profiling by SAGE (8)
Unknown experiment type (8)
Animal - High-throughput sequencing (6)
RNA-seq of non coding RNA (6)
Comparative genomic hybridization by array (5)
RNA-seq of total RNA (5)
Other (4)
ATAC-seq (3)
MicroRNA profiling by array (3)
Methylation profiling by array (3)
DNA-seq (2)
Methylation profiling by high throughput sequencing (2)
Differential (1)
One-color microarray (1)
High-throughput sequencing (1)
Whole chromosome random sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
Spatial transcriptomics by high-throughput sequencing (1)
ScATAC-seq (1)

Release Date

2022 (120)
2023 (117)
2021 (112)
2014 (109)
2024 (94)
2025 (93)
2020 (91)
2018 (88)
2015 (84)
2019 (83)
2016 (78)
2013 (67)
2012 (61)
2017 (57)
2010 (51)
2011 (50)
2008 (41)
2009 (26)
2007 (19)
2026 (14)
2006 (6)
2005 (4)
2004 (3)
2003 (3)
2002 (1)
2001 (1)
1999 (1)

Previous page
1 / 346
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 346
Next page

Sort by:

Relevance

Page size

10

Mus musculus strain:129SvEv/C57BL6 hybrid

Mus musculus strain:129SvEv/C57BL6 hybrid Genome sequencing

PRJNA170680 | ENA

Mus musculus strain:C57BL6/J

Mus musculus strain:C57BL6/J Transcriptome or Gene expression

PRJNA1512713 | ENA

Analysis of 20-HETE supplementation in calorically restricted C57Bl6 mice

Proteomic dataset of 15 murine kidneys of 14-week-old male C57Bl6 mice. Mice were divided into 3 treatment groups four weeks prior to nephrectomy and 5 mice had ad libitum access to food and water, while another 10 mice received 30% food restriction. Calorically restricted mice either received intra...

ORGANISM(S): Mus musculus (Mouse)

2022-06-17 | PXD031604 | Pride

C57bl6 20-hete caloric restriction Preconditioning

Male C57BL6/N and C57BL6/J Mice Respond Differently to Constant Light and Running-Wheel Access.

Not available

S-EPMC6914853 | biostudies-literature

Mus musculus strain:C57BL6

Mus musculus strain:C57BL6 Epigenomics

PRJNA360149 | ENA

Mus musculus strain:C57BL6

Mus musculus strain:C57BL6 Raw sequence reads

PRJNA1238052 | ENA

Mus musculus strain:C57BL6

Mus musculus strain:C57BL6 Raw sequence reads

PRJNA338457 | ENA

Mus musculus strain:C57BL6

Mus musculus strain:C57BL6 Targeted Locus (Loci)

PRJNA358444 | ENA

Mus musculus strain:C57BL6

Mus musculus strain:C57BL6 Targeted Locus (Loci)

PRJNA358445 | ENA

Mus musculus strain:C57BL6

Mus musculus strain:C57BL6 Raw sequence reads

PRJNA786960 | ENA

Previous page
1 / 346
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 346
Next page

Sort by:

Relevance

Page size

10

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data