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MetabolomicsSingle cell lipidomics of adherent gut epithelial cell lines Caco2 and HT29-MTX reveals a metabolic switch

Raw MS data files for the CaCo02 and HT29-MTX single cells isolated using the Yokogawa SS2000 for the research article 'Single cell lipidomics of adherent gut epithelial cell lines Caco2 and HT29-MTX reveals a metabolic switch' 

2026-03-18 | MTBLS14074 | MetaboLights
ProteomicsTbeta4 identification CaCo2 cells
The paper describes new experiments about thymosin beta 4 nuclear translocation using different in vitro cellular stress in CaCo2 cell line adding new details regarding the role of this peptide during adaptive and defensive response. To this purpose, CaCo2 cells were submitted to different stress tr...
ORGANISM(S): Homo sapiens (Human) 
2020-06-29 | PXD012161 | Pride
Caco2 Thymisin beta4 
ProteomicsKIF11 immunoprecipitates from control and RAB11 knockdown CACO2 cells
We want to determine the protein networks that are associated with KIF11 in the presenceor absence of Rab11 in Caco2 cells. We performed immunoprecipitation against KIF11 using an anti-KIF11 antibody in control and Rab11 knockdown Caco2 cells In addition, we included samples of no antibody control t...
ORGANISM(S): Homo sapiens (Human) 
2023-06-05 | PXD042335 | Pride
Kif11 
TranscriptomicsThe effect of prohibitin overexpression in Caco2-BBE intestinal epithelial cells
To determine the effect of prohibitin overexpression on global gene expression in Caco2-BBE intestinal epithelial cells. 4 individual wells of Caco2-BBE cells, passage 41, were transfected with either empty vector (pcDNA4) or prohibitin/pcDNA4 for 72 hours. Total RNA isolated from 4 wells of cells/...
ORGANISM(S): Homo sapiens 
2010-06-19 | E-GEOD-12605 | biostudies-arrayexpress
MetabolomicsMass Spectrometry Imaging of Lipids in a Gut Epithelial Cell Model

Scope: The Caco2/HT29-MTX co-culture system is widely used as a cell model of the intestinal epithelium. Although the gut epithelium plays an important role in the uptake of free fatty acids and the resynthesis of triglycerides, the lipid distribution profile of the two-dimensional co-culture sys...

2025-06-14 | MTBLS12599 | MetaboLights
TranscriptomicsExpression levels of mature miRNAs from Caco2 cell treated with inflammatory cytokines
We used microarray to determine the miRNA whose expression was changed at 6 hours after inflammatory cytokines (TNFα, IL1α, IL1β, or IL6) treatment. Two-condition experiment; Caco2 control vs Caco2 treated with TNFα, IL1α, IL1β,or IL6 for 6 hours
ORGANISM(S): Homo sapiens 
2012-04-21 | E-GEOD-37288 | biostudies-arrayexpress
TranscriptomicsExpression data from SPAK transfected Caco2-BBE cells
Ste20-related proline/alanine rich kinase (SPAK) is involved in diverse function, such as the pathogenesis of inflammatory bowel diseases. It is very important to study the underlying mechanisms by which SPAK regulates the progress of IBD. We used microarrays to detail the global programme of gene e...
ORGANISM(S): Homo sapiens 
2010-11-30 | E-GEOD-25641 | biostudies-arrayexpress
GenomicsHuman Astrovirus CRISPR screen in Caco2 cells
Human Astrovirus CRISPR screen in Caco2 cells
PRJEB71796 | ENA
TranscriptomicsTranscriptional profiling of CD133+/high vs CD133-/low cell populations of Caco2, HT-29 and HUH7 cell lines
Transcriptional profiling of CD133+/high vs CD133-/low cell populations of Caco2, HT-29 and HUH7 cell lines. Further in silico analysis of differentially expressed transcripts and proteins in CD133+/high vs CD133-/low cell populations revealed several potential key molecular regulators of CD133. In ...
ORGANISM(S): Homo sapiens 
2022-09-24 | E-MTAB-11779 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human Caco2 cells treated withmesalazine
Several reports indicate that mesalazine (5-aminosalicylic acid or 5-ASA) is a promising candidate for the chemoprevention of Colo-Rectal Cancer (CRC) due to its ability to reach the purpose, yet avoiding at the same time the side effects that are usually determined by prolonged administrations of N...
ORGANISM(S): Homo sapiens 
2010-02-17 | E-GEOD-14538 | biostudies-arrayexpress
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