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ProteomicsIntegrative Analysis of Transcriptome and Proteome for a new Rumen-derived Bacillus Licheniform in regulating microenvrionment Treating with Different Carbon Sources
Bacillus licheniformis (B. licheniformis) is a microorganism with a wide range of probiotic properties and applications. Isolation and identification of novel strains is a major aspect of microbial research. Besides, the role of different carbon sources affects B. licheniformis in regulating micro-e...
ORGANISM(S): Bacillus licheniformis 
2024-01-26 | PXD042310 | Pride
Transcriptome Bacillus licheniformis Different carbon sources Proteome Cows rumen fluid 
TranscriptomicsTranscriptome response to different carbon sources in Acetobacter aceti
Acetic acid bacteria are obligately aerobic alphaproteobacteria that have a unique ability to incompletely oxidize various alcohols and sugars to organic acids. The ability of these bacteria to incompletely oxidize ethanol to acetate has been historically utilized for vinegar production. The mechani...
ORGANISM(S): Acetobacter aceti NBRC 14818 
2011-01-17 | E-GEOD-24361 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of E. coli cultures grown on different carbon sources
The study investigated the effect of different carbon sources on E. coli global gene expression. We grew MG1655 cells aerobically in MOPS minimal medium with either glucose, glycerol, succinate, L-alanine, acetate, or L-proline as the carbon supply. Samples were taken from each culture at mid log ph...
ORGANISM(S): Escherichia coli 
2007-07-19 | E-GEOD-2037 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis of cellulolytic fungus Penicillium oxalicum and transcription factor mutant strains in response to different carbon sources
RNA-seq was used to compare the responses of Penicillium oxalicum strains to different carbon sources including carbon-starvation, glucose and cellulose. The wild-type strain and transcription facor (ClrB, CreA and AmyR) mutants were studied. A total of 24 samples were analzyed, which include biolog...
ORGANISM(S): Penicillium oxalicum 
2015-05-28 | E-GEOD-69298 | biostudies-arrayexpress
GenomicsCarbon sources in rearing water: Impact on marron gut microbiota
Carbon sources in rearing water: Impact on marron gut microbiota
PRJNA1015270 | ENA
GenomicsTranscriptome-wide expression profile of yeast under different carbon sources
Transcriptome-wide expression profile of yeast under different carbon sources
PRJNA544475 | ENA
ProteomicsThe proteomics of Streptomyces sp. F-3 on different carbon sources
A lable-free quantitative proteomics method was employed to study the difference of Streptomyces sp. F-3 when it grown on different carbon sources
ORGANISM(S): Streptomyces Sp. F-3 
2025-03-25 | PXD062196 |
TranscriptomicsMICROME RNAseq from single carbon sources
As part of Microme, we have been investigating the effects of single carbon sources upon Salmonella Typhimurium and Salmonella Enteritidis. These strains have been grown in a defined medium, supplemented with single carbon sources, in order to determine which genes are expressed in the presence of w...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium 
2014-08-20 | E-ERAD-227 | biostudies-arrayexpress
GenomicsRNA-Seq of Clostridium cellulovorans cultured in different carbon sources in exponential phase
RNA-Seq of Clostridium cellulovorans cultured in different carbon sources in exponential phase
PRJEB57453 | ENA
GenomicsTranscriptional profiling of Candida albicans SC5314 grown on different carbon and nitrogen sources
Transcriptional profiling of Candida albicans SC5314 grown on different carbon and nitrogen sources
PRJNA925798 | ENA
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