Carbonate extraction

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Organisms

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Mass spectrometry (89)
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2003 (8)

CHEBI ID

CHEBI:30769 (51)
CHEBI:16708 (46)
CHEBI:15428 (45)
CHEBI:15741 (45)
CHEBI:15891 (40)
CHEBI:16027 (40)
CHEBI:17750 (39)
CHEBI:16335 (38)
CHEBI:17368 (38)
CHEBI:16704 (37)
CHEBI:30915 (37)
CHEBI:7916 (36)
CHEBI:15422 (35)
CHEBI:16761 (35)
CHEBI:16919 (35)
CHEBI:17596 (35)
CHEBI:6650 (34)
CHEBI:16235 (34)
CHEBI:32816 (34)
CHEBI:16856 (33)
CHEBI:28300 (33)
CHEBI:18012 (33)
CHEBI:16695 (32)
CHEBI:16737 (32)
CHEBI:17562 (31)
CHEBI:16865 (31)
CHEBI:17568 (31)
CHEBI:17295 (31)
CHEBI:16750 (30)
CHEBI:16015 (30)

Metabolite Name

Adenine (35)
Glycine (33)
Taurine (31)
Creatine (31)
Hypoxanthine (31)
Adenosine (30)
Creatinine (29)
AMP (27)
ADP (27)
Inosine (27)
Betaine (26)
L-Tryptophan (25)
Cytidine (24)
Uridine (24)
L-Phenylalanine (24)
L-Proline (23)
Guanine (23)
Xanthine (23)
ATP (22)
L-Alanine (22)
Uracil (22)
Ornithine (22)
NADH (22)
L-Glutamine (22)
Valine (21)
Thymine (21)
Pyridoxine (21)
Glutamine (21)
L-Tyrosine (21)
CDP (20)

First Public Date

2025 (2)
2026 (1)
2024 (1)
2023 (1)
2017 (1)
2014 (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (958)
ChIP-seq (582)
ChIP-chip by tiling array (489)
ChIP-chip by array (147)
RNA-seq of coding RNA (116)
Other (77)
Comparative genomic hybridization by array (31)
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Hi-C (20)
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Methylation profiling by array (17)
High-throughput sequencing (16)
DNA-seq (15)
Transcription profiling by tiling array (14)
RNA-seq of non coding RNA (12)
Animal - High-throughput sequencing (10)
RNA-seq of coding RNA from single cells (9)
Methylation profiling by high throughput sequencing (9)
CUT&RUN (8)
4C (7)
Capture-C (6)
RNA-seq of total RNA (6)
RNAi profiling by array (5)
ATAC-seq (5)
Plant - High-throughput sequencing (4)
RIP-seq (4)
Proteomic profiling by array (3)
MicroRNA profiling by high throughput sequencing (2)
Bisulfite-seq (2)
Exome sequencing (2)

Release Date

2010 (416)
2013 (320)
2011 (318)
2012 (282)
2014 (198)
2015 (179)
2008 (124)
2016 (108)
2009 (104)
2025 (66)
2007 (65)
2022 (63)
2021 (63)
2023 (53)
2006 (52)
2020 (51)
2005 (51)
2019 (49)
2026 (48)
2024 (43)
2018 (41)
2017 (35)
2004 (16)
2003 (9)
2000 (1)

Lab affiliation

Christchurch Heart Institute, Department of Medicine, University of Otago, Christchurch (2)
Fudan University (2)
Harvard Medical School (2)
IBCH RAS (2)
Institute of Microbiology, University Greifswald (2)
Laboratoire de Spectrometrie de Masse BioOrganique (LSMBO), Universite de Strasbourg, CNRS, IPHC UMR 7178, 67087 Strasbourg, France (2)
Nestlé Research – Nestlé Institute of Food Safety & Analytical Sciences (2)
The University of Melbourne (2)
1) Department of Plant Biochemistry, Ruhr University Bochum, Bochum, Germany 2) School of Biomedical and Healthcare Sciences Plymouth University Drake Circus, Plymouth Devon PL4 8AA United Kingdom (1)
AbbVie Bioresearch Center, Worcester, MA 01605, United States (1)
Artemisinin Research Center, Institute of Chinese Materia Medica, China Academy ofChinese Medical Sciences (1)
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090 Vienna, Austria (1)
Chinese Academy of Sciences, Guangzhou (1)
Department Langer - Mitochondrial Proteostasis Max-Planck Institut für Altersforschung Joseph-Stelzmann Str 9b 50931 Cologne, Germany (1)
Department of Biochemistry & Pharmacology, Bio21 Institute, University of Melbourne (1)
Department of Biochemistry and Molecular Biology, Michael Smith Laboratories, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada (1)
Department of Biology, Center for RNA Biology, University of Rochester, Rochester, New York, United States of America (1)
Department of Biology, University of Konstanz, Universitaetsstrasse 10, 78457 Konstanz, Germany (1)
Department of Cell Biology, Harvard Medical School, Boston, MA, USA (1)
Department of Computing and Control Engineering, University of Chemistry and Technology in Prague, Technická 5, 166 28 Praha 6, Czech Republic (1)
Department of Human Molecular Genetics and Biochemistry, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Isrel (1)
Department of Marine Biology and Ecology, Rosenstiel School of Marine and Atmospheric Science, University of Miami, Miami, FL, USA (1)
Department of Marine Biology, University of Haifa, Israel (1)
Department of Parasitology, Institute of Biomedical Sciences, University of Sao Paulo (1)
Department of Systems Biology, Harvard Medical School, Boston, MA 02115, USA (1)
Dr. Andreas Otto Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald (1)
Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency (1)
German Federal Institute for Risk Assessment Department Food Chemistry National Reference Laboratory for Animal Protein in Feed (1)
Group Leader, Institute for Molecular Biosciences, The University of Queensland, Australia (1)
Helmholtz-Centre for Environmental Research - UFZ Department of Molekular Systems Biology Permoserstr. 15, 04318 Leipzig, Germany (1)

Tags

xref:PubMed:37568601 (1)
xref:PubMed:17085555 (1)
pathogen (1)
pathogen:bacterium (1)

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Sodium carbonate extraction mass spectrometry reveals novel steps in mitochondrial respiratory chain complex III assembly

Mitochondria are complex organelles containing 13 proteins encoded by mitochondrial DNA and over 1000 proteins encoded on nuclear DNA. Many mitochondrial proteins are associated with the inner or outer mitochondrial membranes, either peripherally or as integral membrane proteins, while others reside...

ORGANISM(S): Homo sapiens (Human)

2022-03-23 | PXD028935 | Pride

SILAC-based carbonate extraction of subcellular fraction ER

Mitochondria dynamically adapt to cellular stress to ensure cell survival. The stress-regulated mitochondrial peptidase OMA1 orchestrates these adaptive responses, which limit mitochondrial fusion and promote mitochondrial stress signaling and metabolic rewiring. Here, we show that cellular stress a...

ORGANISM(S): Homo sapiens (Human)

2025-12-19 | PXD070854 | Pride

Silac Carbonate extraction Er

Transcriptomic profiles of Japanese medaka (Oryzias latipes) in response to alkalinity stress

Alkalinity stress is considered to be one of the major stressors for fish in saline-alkali water. Thus, it is of great significance from both aquaculture and physiological viewpoint to understand the molecular genetic response of aquatic organisms to alkalinity stress. The objective of this study is...

ORGANISM(S): Oryzias latipes

2014-01-24 | E-GEOD-27298 | biostudies-arrayexpress

Optimization and assessment of a sequential extraction procedure for calcium carbonate rocks.

Not available

S-EPMC8364905 | biostudies-literature

Novel insights in dimethyl carbonate-based extraction of polyhydroxybutyrate (PHB).

Not available

S-EPMC7792028 | biostudies-literature

Studies on the Prediction and Extraction of Methanol and Dimethyl Carbonate by Hydroxyl Ammonium Ionic Liquids.

Not available

S-EPMC10005580 | biostudies-literature

Recognition and Extraction of Cesium Hydroxide and Carbonate by Using a Neutral Multitopic Ion-Pair Receptor.