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TranscriptomicsBulk RNA Barcoding and sequencing (BRB-seq) protocol for RNA-seq of human pre-adipocytes and differentiated adipocytes
Here, we validate a novel protocol, Bulk RNA Barcoding and sequencing (BRB-seq), that combines the multiplexing-driven cost-effectiveness of a single-cell RNA-seq protocol with the efficiency of a bulk RNA-seq procedure. For this we use BRB-seq protocol on human pre-adipocytes and differentiated adi...
ORGANISM(S): Homo sapiens 
2018-02-06 | E-MTAB-6469 | biostudies-arrayexpress
TranscriptomicsDroplet barcoding for single cell transcriptomics applied to embryonic stem cells
Recently, RNA sequencing has achieved single cell resolution, but what is limiting is an effective way to routinely isolate and process large numbers of individual cells for in-depth sequencing, and to do so quantitatively. We have developed a droplet-microfluidic approach for parallel barcoding tho...
ORGANISM(S): Homo sapiens 
2015-05-20 | E-GEOD-65525 | biostudies-arrayexpress
ProteomicsA proteomic barcoding platform for macromolecular screening and delivery
To address the delivery barriers of macromolecular therapeutics, we sought to develop high-throughput peptide barcoding platform as a homogeneous method for macromolecular screening. Implemented in open-source algorithms, BarcodeBabel and PeptideBabel, this approach permits the design of libraries o...
ORGANISM(S): Homo sapiens (Human) 
2025-05-06 | PXD048412 | Pride
Barcodebabel Barcoding Macromolecular drug delivery Peptidebabel 
TranscriptomicsSCRB-seq comparison with TruSeq on bulk RNA-seq human LCL (DMSO) and BAY treated LCL (BAY)
Here, we validate a novel protocol, Bulk RNA Barcoding and sequencing (BRB-seq), that combines the multiplexing-driven cost-effectiveness of a single-cell RNA-seq protocol with the efficiency of a bulk RNA-seq procedure. For this we first gauge the applicability of the SCRB-seq protocol on bulk DMSO...
ORGANISM(S): Homo sapiens 
2018-07-07 | E-MTAB-6984 | biostudies-arrayexpress
TranscriptomicsBulk RNA Barcoding and sequencing (BRB-seq) protocol for RNA-seq of 60 human LCL from the 1000G project
Here, we validate a novel protocol, Bulk RNA Barcoding and sequencing (BRB-seq), that combines the multiplexing-driven cost-effectiveness of a single-cell RNA-seq protocol with the efficiency of a bulk RNA-seq procedure. For this we use BRB-seq protocol on 60 human LCL data from the 1000G project sa...
ORGANISM(S): Homo sapiens 
2018-12-17 | E-MTAB-7524 | biostudies-arrayexpress
GenomicsSingle-Molecule Barcoding Technology for Single-Cell Genomics
Single-Molecule Barcoding Technology for Single-Cell Genomics
PRJNA1137817 | ENA
GenomicsBarcoding reveals complex clonal dynamics of de novo transformed human mammary cells
Most human breast cancers have already diversified genomically when they first become clinically evident, by which time extensive heterogeneous histopathologies, transcriptomes and growth patterns are also apparent. Accordingly, important initial events and the cellular context in which they occur h...
EGAS00001001310 | EGA
UnknownDebarcodeR increases fluorescent cell barcoding capacity and accuracy.
Not available
S-EPMC8410645 | biostudies-literature
UnknownDroplet barcoding for single-cell transcriptomics applied to embryonic stem cells.
Not available
S-EPMC4441768 | biostudies-literature
UnknownDeciphering cell signaling networks with massively multiplexed biosensor barcoding.
Not available
S-EPMC8686192 | biostudies-literature
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