Cell shaving - OmicsDI

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CHEBI ID

CHEBI:193326 (1)
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CHEBI:182866 (1)
CHEBI:125539 (1)
CHEBI:181736 (1)
CHEBI:53785 (1)
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CHEBI:3044 (1)
CHEBI:92338 (1)
CHEBI:109547 (1)
CHEBI:81217 (1)
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CHEBI:4402 (1)
CHEBI:135010 (1)
CHEBI:176310 (1)
CHEBI:188660 (1)
CHEBI:181654 (1)
CHEBI:15948 (1)
CHEBI:60528 (1)
CHEBI:181507 (1)
CHEBI:181913 (1)
CHEBI:189132 (1)
CHEBI:7908 (1)
CHEBI:8255 (1)
CHEBI:108592 (1)
CHEBI:182150 (1)

Metabolite Name

L-Alanine (2)
N-Acetyl-L-phenylalanine (2)
L-Tyrosine (2)
(+-)-Baclofen (1)
(3E)-3-Benzylidene-4-Methyl-1H-1,4-Benzodiazepine-2,5-Dione (1)
(5R)-5-Hydroxy-1-(4-Hydroxy-3-Methoxyphenyl)Tetradecan-3-One (1)
1,2-Dihydroxyheptadec-16-En-4-Yl Acetate (1)
2,5-Dihydroxy-3-Undecylcyclohexa-2,5-Diene-1,4-Dione (1)
2-Naphthalene Sulfonic Acid (1)
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3-Phospho-D-Glycerate (1)
3-Sulfino-L-Alanine (1)
4,4`-Thiodiphenol (1)
4-Methylumbelliferyl Sulfate (1)
5,10-Dimethoxy-2,2-Dimethylpyrano[3,2-G]Chromen-8-One (1)
5,7-Dihydroxy-2-(4-Hydroxyphenyl)-3-Methoxy-4H-Chromen-4-One (1)
5,7-Dihydroxy-6-Methoxy-2-Phenylchromen-4-One (1)
5-Chlorodivaricatinic Acid (1)
Adenosine-3-Monophosphate (1)
Alpha-D-(+)-Mannose 1-Phosphate (1)
Alpha-D-Glucose-1,6-Diphosphate (1)
Alternariol Monomethyl Ether (1)
Beta-Hydroxymyristic Acid (1)
Bisphenol S (BPS) (1)
C12-AS (1)
Chlorothalonil-4-Hydroxy (1)
D-(+)-Pantothenic Acid (1)
Divaricatinic Acid (1)
Dl-3-Aminoisobutyric Acid (1)
Docosahexanoic Acid (1)

First Public Date

2026 (1)
2025 (1)

Modification

Not available (1)

Study type

Transcription profiling by array (19)
RNA-seq of coding RNA (2)

Release Date

2009 (11)
2022 (7)
2020 (7)
2013 (6)
2019 (5)
2016 (5)
2014 (5)
2021 (4)
2017 (4)
2012 (3)
2015 (3)
2008 (2)
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2000 (1)

Lab affiliation

MRC Centre for Medical Mycology University of Exeter, Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, UK (2)
Proteomics Mass Spectrometry, University of Tasmania (2)
Andreas Otto, Institute for Microbiology, Ernst-Moritz-Arndt-University of Greifswald, F.-L. Jahnstrasse 15, 17489 Greifswald, Germany (1)
Departamento de Microbiología II, Universidad Complutense Madrid (1)
Department of Biochemistry and Microbiology Laboratory for Microbiology KL Ledeganckstraat 35 B-9000 Gent Belgium (1)
Department of Biotechnology, Delft University of Technology, The Netherlands. (1)
Department of Chemistry and Biochemistry, Loo, University of California-Los Angeles, United States of America (1)
Department of Comparative Biochemistry and Bioanalytics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University in Krakow (1)
Department of Infection Diseases, Institute of Biomedicine,Sahlgrenska Academy of the University of Gothenburg (1)
Department of Molecular and Applied Microbiology Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute (1)
Department of Molecular and Applied Microbiology Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute Jena, Germany (1)
Division of Cancer Biology, Institute of Cancer Research, 237 Fulham Road, London SW3 6JB, UK. (1)
Drug & Disease Target Team, Division of Bioconvergence Analysis, Korea Basic Science Institute (KBSI), Cheongju 28119, Republic of Korea (1)
EPFL Proteomics Core Facility (1)
FAU Erlangen-Nürnberg, Department Biology, Microbiology, Germany (1)
Head of Proteomics (1)
Institut Pasteur / Trypanosome Cell Biology Unit / 28, rue du Docteur Roux 75015 PARIS (1)
Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, UK. (1)
Institute for Microbiology (1)
Institute of Cancer Research, Division of Cancer Biology, 237 Fulham Road, London SW3 6JB, UK. (1)
Institute of Microbiology, Department of Microbial Proteomics, University of Greifswald, Germany (1)
Institution of Biotechnology University of Helsinki Finland (1)
Lab. Functional Proteomics, Dept Life Sciences, University of Siena, Italy (1)
Max Planck Unit for the Science of Pathogens, Berlin, Germany (1)
Microbial Proteomics, Helmholtz Centre for Infection Research, Braunschweig, Germany; intituite of Microbiology, Technische Universität Braunschweig, Braunschweig, Germany (1)
Microbiology Laboratory, Institute of Viticulture and Agri-food Research (IVAGRO), University of Cádiz, Pol. Río San Pedro s/n, Puerto Real, Cádiz, Spain (1)
Microbiology and Infection Group, Division of Biomedical Sciences, Warwick Medical School, University of Warwick, Coventry CV4 7AL, United Kingdom (1)
Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute, Adolf-Reichwein-Str. 23, 07745, Jena, Germany (1)
Molecular and Cellular Biology Department, University of Guelph, 50 Stone Rd. E., Guelph, ON, N1H 2W1 (1)
Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Denmark Department of Biology and Biological Engineering, Division of Systems and Synthetic Biology, Chalmers University of Technology, Sweden (1)

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xref:PubMed:41638478 (1)

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Tryptic shaving of Staphylococcus aureus

Surface proteins of Gram-positive bacteria are critical for adherence to host tissues, evasion of the immune system, and interaction with the environment. They can be utilized as biomarkers in diagnostics, for vaccine development, and as therapeutic targets due to their accessibility and role in pat...

ORGANISM(S): Bacteria Staphylococcus aureus

2025-09-15 | PXD061994 | Pride

Epitope Shaving Promotes Fungal Immune Evasion.

Not available

S-EPMC7343991 | biostudies-literature

Within-host adaptive phenotypic responses of bovine Staphylococcus aureus

The Gram-positive bacterium S. aureus is one of the most common causes of contagious bovine mastitis. A predominant S. aureus clone persists within its host over a long period. In the present study, we compared the surface proteome of two isolates, collected from a naturally infected dairy cow with ...

ORGANISM(S): Staphylococcus aureus

2021-08-14 | PXD025013 | Pride

Chronic bovine mastitis Surface shaving Biotinylaton Host adaption Staphylococcus aureus Cell surface proteome

'Gene shaving' as a method for identifying distinct sets of genes with similar expression patterns.

Not available

S-EPMC15015 | biostudies-literature

Gardnerella vaginalis cell surface shaving

Study of Gardnerella vaginalis cell surface proteome

ORGANISM(S): Gardnerella vaginalis

2018-06-06 | PXD003192 | Pride

Gardnerella vaginalis surface proteome

Growth condition-dependent cell surface proteome analysis of Enterococcus faecium

Using a proteolytic shaving approach we identified differentially expressed surface exposed proteins of E. faecium cells after growth in different conditions.

ORGANISM(S): Enterococcus Faecium E1162 (ncbitaxon:535206)

2015-07-07 | MSV000079184 | MassIVE

Unraveling Gardnerella vaginalis Surface Proteins Using Cell Shaving Proteomics.

Not available

S-EPMC5962675 | biostudies-literature

Epitope shaving and fungal immune evasion – cell wall proteomes

The cell wall provides a major physical interface between fungal pathogens and their mammalian host. This extracellular armour is critical for fungal cell homeostasis and survival. Yet essential cell wall moieties, such as β-1,3-glucan, are recognised as pathogen-associated molecular patterns (PAMPs...

ORGANISM(S): Candida albicans (Yeast)

2020-06-15 | PXD018027 | Pride

Candida albicans Lc-msms Cell wall

Shaving Is an Epiphenomenon of Type I and II Anti-CD20-Mediated Phagocytosis, whereas Antigenic Modulation Limits Type I Monoclonal Antibody Efficacy.

Not available

S-EPMC6082343 | biostudies-literature

Isolation and identification of Enterococcus faecalis membrane proteins using membrane shaving, 1D SDS/PAGE, and mass spectrometry.

Not available

S-EPMC4887974 | biostudies-literature

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