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UnknownGalectin-3 promotes HIV-1 budding via association with Alix and Gag p6.
Not available
S-EPMC4181451 | biostudies-literature
ProteomicsHighly reproducible improved label-free quantitative analysis of cellular phosphoproteome by optimization of LC-MS/MS gradient and analytical column construction
Expanding the sequencing depth of the peptides showing a statistically significant quantitative change arising from a biological stimulation is critical. Here we demonstrate that optimization of LC gradient and analytical column construction can reveal over 30,000 unique peptides and 23,000 phosphop...
ORGANISM(S): Homo sapiens (Human) 
2018-10-26 | PXD005650 | Pride
Human T cell Acute leukemia Q exactive Phosphoproteomics Label free 
TranscriptomicsUncovering small RNA-mediated responses to phosphate-deficiency in Arabidopsis by deep sequencing
Deep sequencing of Arabidopsis thaliana small RNAs was conducted to reveal microRNAs (miRNAs) and other small RNAs that were differentially expressed in response to phosphate (Pi) deficiency. About 3.5 million sequence reads corresponding to 0.6-1.2 million unique sequence tags from each Pi-sufficie...
ORGANISM(S): Arabidopsis thaliana 
2009-12-01 | E-GEOD-17741 | biostudies-arrayexpress
ProteomicsStandard Pressure LC-MS/MS Using 1.9um C18 Particles Column at Room Temperature
Although the benefits of reduction of the size of reversed phase particles are established to provide increased sequencing depth and improved chromatography in LCMS experiments, the wide-scale adoption of optimally sized small particles in reversed-phase columns has been hampered by the necessity fo...
ORGANISM(S): Homo sapiens (Human) 
2022-02-28 | PXD002895 | Pride
Fritless column Jurkat Single-run proteomics Lc-ms/ms 
ProteomicsTransporter characterisation reveals aminoethylphosphonate mineralisation as a key step in the marine phosphorus redox cycle
The planktonic synthesis of reduced organophosphorus molecules, such as alkylphosphonates and aminophosphonates, represents one half of a vast global oceanic phosphorus redox cycle. Whilst alkylphosphonates tend to accumulate in recalcitrant dissolved organic matter, aminophosphonates do not. Thus, ...
ORGANISM(S): Stappia stellulata DSM 5886 Pseudomonas putida (strain BIRD-1) 
2021-09-07 | PXD026804 | Pride
Phosphorus redox cycle Transporter Proteomics Warwick-rtp Lcmsms 
TranscriptomicsInhibition of the LSD1 (KDM1A) demethylase reactivates the all-trans-retinoic acid differentiation pathway in acute myeloid leukemia [Illumina HumanHT-12 gene expression array]
All-trans-retinoic acid (ATRA) has been successfully used in therapy of acute promyelocytic leukemia (APL), a cytogenetically distinct subtype of acute myeloid leukemia (AML) but the response of non-APL AML cases to ATRA-based treatment has been poor. Here we show that, via epigenetic reprogramming,...
ORGANISM(S): Homo sapiens 
2012-03-14 | E-GEOD-34672 | biostudies-arrayexpress
UnknownDeducing acidification rates based on short-term time series.
Not available
S-EPMC4648385 | biostudies-literature
UnknownA scalable implementation of the recursive least-squares algorithm for training spiking neural networks.
Not available
S-EPMC10333503 | biostudies-literature
UnknownA comprehensive multi-layered analysis reveals genetic pleiotropy underlying coronary artery calcification and bone mineral density.
Not available
S-EPMC12928696 | biostudies-literature
UnknownVascular Regulation by Super Enhancer-Derived LINC00607.
Not available
S-EPMC9274098 | biostudies-literature
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