Chen Binbin B - OmicsDI

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Proteomics (4)
Transcriptomics (1)
Metabolomics (1)

Organisms

Homo sapiens (2)
Mus musculus (2)
Nicotiana tabacum (1)

Repository

iProX (4)
biostudies-arrayexpress (1)
MetaboLights (1)

Technology Type

Mass spectrometry assay (1)

Instrument Platform

Liquid Chromatography MS - alternating - reverse-phase (1)

Publication Date

2026 (2)
2023 (2)
2013 (1)
2024 (1)

CHEBI ID

CHEBI:145571 (1)

Metabolite Name

(+)-WIN 55,212-2 (1)
(+/-)-C75 (1)
(+/-)-Gingerol (1)
(+/-)12(13)-DiHOME (1)
(+/-)12-HpETE (1)
(+/-)13-HODE (1)
(+/-)18-HEPE (1)
(+/-)19(20)-DiHDPA (1)
(+/-)8(9)-DiHET (1)
(+/-)9,10-dihydroxy-12Z-octadecenoic acid (1)
(-)-Camphanic acid (1)
(15Z)-9,12,13-Trihydroxy-15-octadecenoic acid (1)
(1S,6R,11aR,13R,14aS)-1,13-dihydroxy-6-methyl-1H,4H,6H,7H,8H,9H,11aH,12H,13H,14H,14aH-cyclopenta[f]oxacyclotridecan-4-one (1)
(2E)-3-(4-Acetoxy-2,3-dihydroxy-2,5,5,8a-tetramethyldecahydro-1-naphthalenyl)acrylic acid (1)
(2E)-3-(Acetoxymethyl)-5-[(1S,4aR,8aR)-2-(hydroxymethyl)-5,5,8a-trimethyl-1,4,4a,5,6,7,8,8a-octahydro-1-naphthalenyl]-2-pentenoic acid (1)
(2E)-5-[(8aS)-2,5,5,8a-tetramethyl-3-oxo-3,4,4a,5,6,7,8,8a-octahydronaphthalen-1-yl]-3-methylpent-2-enoic acid (1)
(2E,4E)-N-(2-methylpropyl)dodeca-2,4-dienamide (1)
(2R)-2,3-Dihydroxypropanoic acid (1)
(2S)-N-[(2S)-1-Amino-3-cyclohexyl-1-oxo-2-propanyl]-1-(cyclohexylcarbonyl)-4-[4-(dimethylamino)benzoyl]-2-piperazinecarboxamide (1)
(2S,3R,4S,5S,6R)-2-{[(2S)-2-[(2R,5S,8S,10R,11R,14S,15R,16R)-8-{[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}oxan-2-yl]oxy}-5,16-dihydroxy-2,6,6,10,11-pentamethyltetracyclo[8.7.0.0??,?¡?0?a?a,?a??]heptadecan-14-yl]-6-methylhept-5-en-2-yl]oxy}-6-(hydroxymethyl)oxane-3,4,5-triol (1)
(2S,3S)-8-[(2R,3S)-5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl]-3,5,7-trihydroxy-2-(4-hydroxyphenyl)-3,4-dihydro-2H-1-benzopyran-4-one (1)
(2S,5aS,8aR)-1-Methyl-6-(4-methylbenzyl)-2-[3-(4-morpholinyl)-3-oxopropyl]octahydropyrrolo[3,2-E][1,4]diazepin-5(2H)-one (1)
(2S,5aS,8aR)-6-(4-Methoxybenzyl)-1-methyl-2-[3-(4-morpholinyl)-3-oxopropyl]octahydropyrrolo[3,2-E][1,4]diazepin-5(2H)-one (1)
(2Z)-2-Octyl-2-pentenedioic acid (1)
(2Z)-5-(1,2,4a,5-tetramethyl-7-oxo-1,2,3,4,4a,7,8,8a-octahydronaphthalen-1-yl)-3-methylpent-2-enoic acid (1)
(3E,6R)-6-hydroxy-6-[(1R,2R,4S,10S,11S,13R,15R)-13-hydroxy-1,6,6,11,15-pentamethyl-5,17-dioxo-4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}tetracyclo[8.7.0.0??,?¡?0?a?a,?a??]heptadec-7-en-14-yl]-2-methyl-5-oxohept-3-en-2-yl acetate (1)
(3R,5S)-1-(1H-Imidazol-2-ylmethyl)-5-[3-(3-nitrophenyl)-1,2,4-oxadiazol-5-yl]-3-pyrrolidinol (1)
(3R,5S)-1-Isopropyl-5-[3-(3-pyridinyl)-1,2,4-oxadiazol-5-yl]-3-pyrrolidinol (1)
(3beta,5xi,6alpha,9xi,12beta)-20-(beta-D-Glucopyranosyloxy)-3,12-dihydroxydammar-24-en-6-yl beta-D-glucopyranoside (1)
(3beta,8xi,9xi,12beta,14beta)-11,12,14-Trihydroxy-20-oxopregn-5-en-3-yl 6-deoxyhexopyranosyl-(1-4)-2,6-dideoxy-3-O-methylhexopyranosyl-(1-4)-2,6-dideoxy-3-O-methylhexopyranoside (1)

Study type

Transcription profiling by array (1)

Release Date

2013 (1)

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TDRD6 IP-MS data in mouse testis protein lysates

We immunoprecipitated endogenous TDRD6 from testis protein lysates of 28-day-old wild-type mice using our home-made TDRD6 antiserum. No TDRD6 protein was identified in Tdrd6-mutant mice carrying the p.G615X (GGG to TGA) variant. Thus, Tdrd6-mutant mice were utilized as negative control. A high-throu...

ORGANISM(S): Mus Musculus

2023-05-11 | PXD042162 |

Limosilactobacillus reuteri with indole-3-lactic acid-producing capacity protects against atherosclerosis by fortifying the gut-vascular barrier

Introduction: The gut microbiota and its metabolites are implicated in atherosclerosis, but the specific effector molecules and their pathophysiological significance remain unclear.

Objectives: This study aimed to identify key atheroprotective microbial metabolites and to elucidate the mech...

2026-01-31 | MTBLS13620 | MetaboLights

Study on the molecular mechanism of chilling injury of flue-cured tobacco

Proteomic and metabolomic tests were carried out on chilling injured tobacco leaves and normal tobacco leaves occurring in the field. Compare the differences and complete the study on the molecular mechanism of tobacco leaf's chilling injury

ORGANISM(S): Nicotiana Tabacum

2024-08-28 | PXD055372 |

Blood and Urine-Based Liquid Biopsy for early stage cancer investigation: Taken Clear Renal Cell Carcinoma as A Model

We analyzed samples of tumor tissue, plasma, and urine from a cohort of 27 ccRCC patients with T1-2 stage and 27 matched healthy controls, using liquid chromatography–mass spectrometry (LC-MS) for proteomic analysis. We integrated the differential proteins found in the three types of samples to expl...

ORGANISM(S): Homo Sapiens

2023-06-20 | PXD043118 |

Physical exercise in combination with audiovisual stimulation alleviates cognitive and affective impairments in Alzheimer's disease model mice

This project focus on the proteomic changes in AD model mice. AD model mice were established by injecting Aβ₄₂ oligomers into the hippocampus. These mice were then subjected to treadmill training(ADE), 40 Hz audio-visual stimulation(ADVL), or a combination of these interventions(ADEVL). Quantitative...

ORGANISM(S): Mus Musculus

2026-04-27 | PXD077685 |

T lymphocytes from Chronic HCV-infected patients express unique pro-apoptotic gene signature.

Although extensive studies have demonstrated the gene expression patterns of antigen-specific CD4+ and CD8+ T-cells during chronic hepatitis C virus (HCV) infection, the transcriptional profiles of global CD4+ and CD8+ T-cells remains unclear. In this report, we recruited 10 long-term (~20 years) tr...

ORGANISM(S): Homo sapiens

2013-08-19 | E-GEOD-49954 | biostudies-arrayexpress

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