Chen Chen-Chen CC

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Unknown (8377)
Proteomics (137)
Transcriptomics (84)
Genomics (36)
Metabolomics (19)
Multiomics (2)
Genomic (1)
Other (1)

Organisms

Homo sapiens (149)
Mus musculus (44)
Arabidopsis thaliana (12)
Rattus norvegicus (9)
Manihot esculenta (2)
Ovis aries (2)
Danio rerio (2)
Bos taurus (2)
Drosophila melanogaster (2)
Pteropus alecto (1)
Tuber melanosporum (1)
Mustela putorius furo (1)
Populus x canadensis (1)
Mus musculus domesticus (1)
Schizosaccharomyces pombe (1)
Caenorhabditis elegans (1)
Saccharomyces cerevisiae (1)
Ralstonia solanacearum Po82 (1)
Solanum tuberosum (1)
Acinetobacter baumannii (1)
Aspergillus nidulans (1)
Citrullus lanatus (1)
Coprinopsis cinerea AmutBmut pab1-1 (1)
Equus caballus (1)
Haloferax volcanii DS2 (1)
Helicobacter pylori 26695 (1)
Homo (1)
Komagataella pastoris (1)
Lentinula edodes (1)
Mesocricetus auratus (1)

Organisms

Populus x canadensis (1)

Repository

pride (101)
biostudies-arrayexpress (94)
EGA (26)
MetaboLights (17)
MassIVE (15)
PeptideAtlas (12)
iProX (7)
GNPS (2)
jPOST (2)
dbGaP (1)
GPMDB (1)
ENA (1)

Tissue

Cell culture (22)
Others (11)
Epithelial cell (10)
Blood plasma (6)
Brain (6)
Lung (6)
B cell (4)
Blood (3)
HeLa cell (3)
Kidney (3)
Testis (3)
Blood cell (2)
Blood serum (2)
Heart (2)
Liver (2)
Lung (1)
Adipose tissue (1)
Blood cancer cell (1)
Blood platelet (1)
Bone cancer cell line (1)
Brain cancer cell line (1)
Breast cancer cell (1)
Breast cancer cell line (1)
Cardiac muscle cell (1)
Cecum cancer cell line (1)
Cerebellar granule cell (1)
Cervical cancer cell line (1)
Colonic cancer cell (1)
Colorectal cancer cell line (1)
Dendritic cell (1)

Disease

Breast cancer (4)
Disease free (4)
Colon cancer (3)
Cardiovascular system disease (2)
Cervix carcinoma (2)
Type 2 diabetes mellitus (2)
HPV positive (1)
Leukemia (1)
Not Available (1)
Non-small Cell Lung Carcinoma (1)
Brain cancer (1)
COVID-19 (1)
Capillary leak syndrome (1)
Congenital heart disease (1)
Fibromyalgia (1)
Heart disease (1)
IgA glomerulonephritis (1)
Inflammation (1)
Insulin insensitivity (1)
Long COVID (1)
Lung cancer (1)
Lymphoma (1)
Major depressive disorder (1)
Malignant neoplasm of ovary (1)
Nephrogenic diabetes insipidus (1)
Non-small cell lung carcinoma (1)
Pancreatic ductal adenocarcinoma (1)
Peritoneal mesothelioma (1)
Prostate adenocarcinoma (1)
Secondary progressive multiple sclerosis (1)

Technology Type

Mass Spectrometry (101)
Shotgun proteomics (53)
Bottom-up proteomics (23)
Mass spectrometry (16)
Gel-based experiment (11)
Data-dependent acquisition (10)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-independent acquisition (4)
AB 5500 Genetic Analyzer, Ion Torrent PGM (1)
Illumina HiSeq 1000, Ion Torrent PGM, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2500 (1)
Life Tech - Solid (1)
Mass spectrometry assay (1)
Affinity proteomics (1)
All-ion fragmentation (1)
DiaPASEF (1)
Proteogenomics (1)
SRM/MRM (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

TripleTOF 5600 (15)
Liquid Chromatography MS - positive - reverse phase (8)
LTQ Orbitrap Elite (4)
Q Exactive (3)
Illumina HiSeq 4000 (2)
LTQ Orbitrap Velos (2)
LTQ Velos (2)
Gas Chromatography MS - (2)
Liquid Chromatography MS - negative - reverse phase (2)
Dell T8310 (1)
Scanning hardware (1)
Axon GenePix 4000B scanning hardware (1)
Illumina HiSeq X (1)
Illumina HiSeq 2500 (1)
LTQ FT (1)
MaXis (1)
Q Exactive Plus (1)
Instrument (1)
LTQ Orbitrap (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion ETD (1)
Q-Exactive HF (1)
TripleTOF 6600 (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
MS Imaging - (1)
MaXis (Bruker) (1)

Publication Date

2015 (27)
2014 (21)
2023 (20)
2022 (19)
2018 (16)
2012 (15)
2024 (14)
2025 (14)
2013 (13)
2019 (12)
2010 (12)
2021 (12)
2026 (12)
2020 (10)
2017 (9)
2016 (9)
2011 (5)
2009 (3)
2006 (3)
2008 (2)
2007 (1)
2003 (1)

UNIPROT ID/AC

A5A3E0 (12)
B3KML9 (12)
B4DKM5 (12)
B4E3A4 (12)
D3DPU2 (12)
E5RJU9 (12)
E7EX29 (12)
G8JLB6 (12)
H0Y5C6 (12)
H0YM50 (12)
H3BS72 (12)
H7BZ94 (12)
H7C144 (12)
I3L3D5 (12)
I3L4N8 (12)
J3KPS3 (12)
M0QZ52 (12)
O00264 (12)
O00567 (12)
O15127 (12)
O15173 (12)
O15258 (12)
O43399 (12)
O43707 (12)
O43707-3 (12)
O60763 (12)
O60763-2 (12)
O75367 (12)
O75367-2 (12)
O75369 (12)

ENSEMBL ID

ENSG00000170477 (11)
ENSG00000147251 (5)

CHEBI ID

CHEBI:28865 (5)
CHEBI:16359 (4)
CHEBI:16811 (3)
CHEBI:17148 (3)
CHEBI:27432 (3)
CHEBI:30769 (3)
CHEBI:35038 (3)
CHEBI:64489 (3)
CHEBI:64563 (3)
CHEBI:73858 (3)
CHEBI:80774 (3)
CHEBI:10136 (2)
CHEBI:116314 (2)
CHEBI:131342 (2)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:15366 (2)
CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15843 (2)
CHEBI:16196 (2)
CHEBI:16411 (2)
CHEBI:16414 (2)
CHEBI:16467 (2)
CHEBI:16551 (2)
CHEBI:16610 (2)
CHEBI:16750 (2)
CHEBI:16755 (2)

Metabolite Name

1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (3)
Cholic acid (3)
Citric acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-(9Z-Octadecenoyl)-sn-glycero-3-phosphocholine (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
Acetic acid (2)
Conjugated linoleic Acid (10E,12Z) (2)
Dodecanoic acid (2)
Elaidic acid (2)
Fumaric acid (2)
Glycine (2)
L-Tyrosine (2)
Lyso-PC(16:0) (2)
Methionine (2)
Monoelaidin (2)
Monoolein (2)
Myristoleic acid (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Ornithine (2)
Oxalic acid (2)
Palmitic acid (2)
Purine (2)
Putrescine (2)
Spermidine (2)
Stearic acid (2)
Succinic acid (2)

First Public Date

2014 (1)

Study type

Transcription profiling by array (55)
RNA-seq of coding RNA (15)
Unknown experiment type (6)
ChIP-seq (4)
Methylation profiling by high throughput sequencing (4)
Methylation profiling by array (3)
RNA-seq of non coding RNA (2)
Human - Single-cell sequencing (1)
Comparative genomic hybridization by array (1)
Other (1)
DNA-seq (1)

Release Date

2022 (1000)
2021 (955)
2023 (809)
2025 (754)
2024 (690)
2020 (654)
2019 (548)
2017 (533)
2018 (512)
2016 (421)
2015 (412)
2014 (312)
2013 (201)
2012 (181)
2011 (133)
2010 (93)
2026 (91)
2009 (47)
2008 (34)
2007 (25)
2006 (20)
2005 (18)
2004 (10)
2002 (4)
1998 (4)
2003 (3)
1999 (3)
2001 (2)
1997 (1)
1992 (1)

Lab affiliation

Institute of Chemistry, Academia Sinica (4)
Institute of Clinical Medicine in National Yang-Ming Chiao Tung University, Taiwan (Muh-Hwa Yang Lab) (3)
Metabolomics-Proteomics Research Center, National Yang Ming Chiao Tung University, Taipei 11221, Taiwan (3)
Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, University of Sydney, Camperdown, NSW, Australia (2)
Icahn School of Medicine at Mount Sinai (2)
Institute of Plant and Microbial Biology, Academia Sinica (2)
Lineberger Comprehensive Cancer Center, UNC Chapel Hill (2)
1 Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
1Department of Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA (1)
2011 Collaborative Innovation Center of Tianjin for Medical Epigenetics, Tianjin Key Laboratory of Medical Epigenetics, Key Laboratory of Immune Microenvironment and Disease (Ministry of Education), Department of Biochemistry and Molecular Biology, Tianjin Medical University, Tianjin 300070, China (1)
Academia Sinica (1)
Academia Sinica Institute of Biological Chemistry(IBC), Dr. Shih-Hsiung Wu's lab, Taipei, Taiwan (R.O.C.) (1)
Assistant Research Specialist, Institute of Chemistry, Academia Sinica (1)
Beijing Academy of Agriculture and Forestry Sciences (1)
Cancer and Immunology Research Center, National Yang Ming Chiao Tung University (1)
Chang Gung Memorial Hospital (1)
Chun-Hung Lin's Lab, Institute of Biological Chemistry, Academia Sinica, No. 128 Academic Road Section 2, Nan-Kang, Taipei, 11529, Taiwan (1)
Clinical Proteomics Lab, Chang Gung Memorial Hospital, Linkou, Taiwan. (1)
College of Animal Science and Technology, Huazhong Agricultural University, No.1 Shizishan Road, Hongshan District, Wuhan 430070, China National Engineering and Technology Research Center For Livestock; The Breeding Swine Quality Supervision and Testing Center, Ministry of Agriculture, Wuhan 430070, China (1)
Department of Andrology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, China (1)
Department of Biochemistry and Molecular Biology and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC 3010, Australia (1)
Department of Biochemistry, Purdue University, West Lafayette, IN USA (1)
Department of Biomedical Science and Environmental Biology, College of Life Science, Kaohsiung Medical University (1)
Department of Cancer Biology, Wake Forest Baptist Hospital (1)
Department of Cardiology, The Second Affiliated Hospital of Fujian Medical University, 950 Donghai Street, Fengze District, Quanzhou, Fujian Province, 362000, China. (1)
Department of Developmental and Molecular Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA (1)
Department of Developmental and Molecular Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA. (1)
Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology (1)
Department of Medical Biotechnology and Laboratory Science, Chang Gung University, Taiwan, Republic of China (1)

Tags

xref:PubMed:18721163 (1)

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Gastric Cancer Study GC_126

126 gastric tissues (90 tumor, 14 lymphnode and 22 normal) assayed using 44K human arrays against common reference (CRG). Published by Leung et al, PNAS, 2002 (PubMed ID 12456890) and Chen et al, MBC, 2003. A clinical history design type is where the organisms clinical history of diagnosis, treatmen...

ORGANISM(S): Homo sapiens

2010-06-10 | E-GEOD-2701 | biostudies-arrayexpress

Stomatin modulates adipogenesis through ERK pathway and regulates fatty acid uptake and lipid droplet growth

Controlling fatty acid uptake, lipid production and storage, and metabolism of lipid droplets (LDs), is closely related to lipid homeostasis, adipocyte hypertrophy and obesity. We report here that stomatin, a major constituent of lipid rafts, participates in adipogenesis and adipocyte maturation by ...

ORGANISM(S): Mus musculus (Mouse)

2022-07-05 | PXD031866 | Pride

A revision of the genus <i>Miccolamia</i> Bates from China (Coleoptera, Cerambycidae, Lamiinae, Desmiphorini).

Not available

S-EPMC12715514 | biostudies-literature

First record of Jacobsoniidae (Coleoptera) from China with description of a new species of Sarothrias Grouvelle.

Not available

S-EPMC4410156 | biostudies-literature

Changes in Soil Bacterial and Nematode Communities during Long-term Continuous Cotton Cropping in an Arid Region.

Not available

S-EPMC11443426 | biostudies-literature

Revision of the Taiwanese millipede genus Chamberlinius Wang, 1956, with descriptions of two new species and a reclassification of the tribe Chamberlinini (Diplopoda, Polydesmida, Paradoxosomatidae, Paradoxosomatinae).

Not available

S-EPMC3095131 | biostudies-literature

Cytogenetics of Two Onychostoma Species in Taiwan by Ag-NOR and 18S rDNA Profiles.

Not available

S-EPMC6517726 | biostudies-literature

Development of Novel Polymorphic Microsatellite Markers in Catch Bowl Coral, Isopora palifera (Scleractinia; Acroporidae) Using Next-generation Sequencing.

Not available

S-EPMC6517735 | biostudies-literature

Interleukin-18 genetic polymorphisms contribute differentially to the susceptibility to Crohn's disease.

Not available

S-EPMC4515852 | biostudies-literature

Exogenous L-Alanine promotes phagocytosis multidrug-resistant bacterial pathogens (L-Alanine-treated macrophage metabolomics)

Multidrug-resistant bacteria present a major threat to public health. Therefore, new drugs or approaches are urgently needed to manage and mitigate this threat. Here, we screen the molecular candidates that allow the survival of mice upon Vibrio parahaemolyticus infection by integrated p...

2024-09-26 | MTBLS7986 | MetaboLights

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