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TranscriptomicsHigh-throughput sequencing of small RNA transcriptomes in Locusta migratoria
All the reports on insect small RNAs come from holometabolous insects. However, small RNAs of hemimetabolous insects have not yet been investigated.Study of hemimetabolous insect small RNAs could provide more insights into evolution and function of small RNAs in hemi- and holometabolous insects. The...
ORGANISM(S): Locusta migratoria 
2009-01-16 | E-GEOD-12640 | biostudies-arrayexpress
ProteomicsMaintaining Basal B-RAF Kinase Activity and ABA signaling via Single Serine Dephosphorylation and Autophosphorylation
The phytohormone abscisic acid (ABA) regulates plant responses to environmental stresses, development, and immunity. Under unfavorable conditions, ABA forms a complex with its receptor proteins PYR1/PYLs/RCARs, inhibiting A clade PP2C phosphatases and releasing SnRK2s from PP2C-mediated inhibition. ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2025-11-10 | PXD053394 | Pride
Arabidopsis Protein phosphatase 2c(pp2c) Abiotic stress Abscisic acid (aba) Raf kinase Protein phosphorylation 
UnknownNRBF2 homodimerization by its coiled-coil domain strengthens association with the PtdIns3K complex mediated by the MIT domain to promote autophagy.
Not available
S-EPMC12758336 | biostudies-literature
TranscriptomicsComparison of Nanostring nCounter data on FFPE colon cancer samples and Affymetrix microarray data on matched frozen tissues
The prognosis of colorectal cancer (CRC) stage II and III patients is still a challenge due to the difficulties of finding robust biomarkers and assays. The majority of published gene signatures of CRC have been generated on frozen colorectal tissues. Because collection of fresh frozen tissues is no...
ORGANISM(S): Homo sapiens 
2015-10-27 | E-GEOD-62932 | biostudies-arrayexpress
TranscriptomicsArsenic-induced Changes in L2 Cells
Arsenic is a carcinogen that is known to induce cell transformation and tumor formation. Although studies have been performed to examine the modulation of signaling molecules caused by arsenic exposure, the molecular mechanisms by which arsenic causes cancer are still unclear. We hypothesized that ...
ORGANISM(S): Rattus norvegicus 
2011-12-23 | E-GEOD-9790 | biostudies-arrayexpress
ProteomicsDIA-based phosphoproteomics identifies early phosphorylation events in response to EGTA and mannitol in Arabidopsis
The rapid activation of RAF-SnRK2 cascades in response to hyperosmolarity is a crucial event in plants' adaptation to osmotic stress, yet the underlying mechanisms have remained elusive. In this study, we reveal that the calcium chelator EGTA, but not other calcium modulators, can potently activate ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2024-04-18 | PXD046802 | Pride
Arabidopsis Dia Phosphoproteomics Egta 
UnknownRotenone inhibited osteosarcoma metastasis by modulating ZO-2 expression and location via the ROS/Ca<sup>2+</sup>/AMPK pathway.
Not available
S-EPMC12010658 | biostudies-literature
ProteomicsUniversal plant phosphoproteomics workflow and its application to tomato signaling in response to cold stress
Phosphorylation-mediated signaling transduction plays a crucial role in the regulation of plant defense mechanisms against environmental stresses. To address the high complexity and dynamic range of plant proteomes and phosphoproteomes, we present a universal sample preparation procedure that facili...
ORGANISM(S): Solanum Pimpinellifolium Solanum Lycopersicum 
2018-09-20 | PXD010310 | JPOST Repository
UnknownGenome-wide identification, phylogenetic and expression pattern analysis of HSF family genes in the Rye (Secale cereale L.).
Not available
S-EPMC10510194 | biostudies-literature
UnknownRole of intestinal SCFAs homeostasis in the hepatoprotective effect of Clostridium butyricum in T2DM.
Not available
S-EPMC12606137 | biostudies-literature
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