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ProteomicsB. abortus 104M LC-MS/MS - A comprehensive proteogenomic study of the human Brucella vaccine strain 104 M
In the present study, we performed subcellular fractionation prior to protein extraction to reduce interference. Whole cell protein and membrane protein extracts were prepared for strain 104M. Peptide fractionation prior to analysis is an alternative method that achieves higher proteome coverage. Co...
ORGANISM(S): Brucella abortus 104M 
2017-05-29 | PXD005403 | Pride
B. abortus 104m Lc-ms/ms 
ProteomicsChinese yew seed dormancy and germination
This project try to provide Chinese yew dormant and germinating seed proteome
ORGANISM(S): Taxus Mairei 
PXD042641 |
UnknownComprehensive analysis of pyroptosis regulators and tumor immune microenvironment in clear cell renal cell carcinoma.
Not available
S-EPMC8670029 | biostudies-literature
TranscriptomicsDifferentiation of human embryonic stem cells towards hepatocytes
To understand in detail the molecular phases that occur during the differentiation of human embryonic stem cells to hepatocyte-like cells we performed an RNA-seq time course of the stages of differentiation across the 21 day differentiation time course. We used a chemically defined (serum-free) prot...
ORGANISM(S): Homo sapiens 
2017-04-28 | E-GEOD-70741 | biostudies-arrayexpress
Proteomicsproteomics analysis of small extracellular vesicles from mouse liver tissue across age groups
The project aims to investigate the proteomic changes in small extracellular vesicles (sEVs) derived from mouse liver tissue across different age groups to identify proteins associated with aging. The study employs a comprehensive proteomic analysis to reveal age-dependent alterations in protein exp...
ORGANISM(S): Mus musculus (Mouse) 
2025-01-09 | PXD059350 | Pride
Mouse liver sevs lc-ms/ms aging 
UnknownMolecular characteristics of primary pulmonary lymphoepithelioma-like carcinoma based on integrated genomic analyses.
Not available
S-EPMC7791019 | biostudies-literature
TranscriptomicsRNA m5C Methylation in breast cancer using MeRIP-Seq
RNA m5C methylation profile of MCF10A and MDA486 by using MeRIP-Seq protocol Immunoprecipitation of Methylated mRNA at Cytosine (m5C) residues: Affinity purified of anti-methyl cytosine (m5C) polyclonal antibody 7ug (Zymo Research, Catalog#A3001-50) was conjugated with protein-A magnetic beads for 2...
ORGANISM(S): Homo sapiens 
2014-02-20 | E-GEOD-53370 | biostudies-arrayexpress
ProteomicsPinctada fucata martensii shell matrix protein LC-MSMS
Nacre, the iridescent material found in pearls and shells of molluscs, is formed through an extraordinary process of matrix-assisted biomineralization. Despite recent advances, many parts of the biomineralization process and its evolutionary origin remain a mystery. The pearl oyster Pinctada fucata ...
ORGANISM(S): Bivalvia 
2017-07-07 | PXD006786 | Pride
Lc-msms Shell matrix protein Pearl oyster 
UnknownInsights from multi-omics integration into seed germination of Taxus chinensis var mairei.
Not available
S-EPMC10495361 | biostudies-literature
TranscriptomicsHypoxia transcriptome sequencing of blind mole rat (BMR, Spalax galili) and rat (Rattus norvegicus)
Deep sequencing of mRNA from Spalax galili and Rattus norvegicus Total RNAs were isolated from the brain of female BMRs under various oxygen concentrations (3%, 6%, 10%, 14%, and 21%) for 6 hours. We also got RNAs from the brain of rats under 6%, 10%, 14%, and 21% oxygen conditions.
ORGANISM(S): Nannospalax galili 
2014-06-05 | E-GEOD-49485 | biostudies-arrayexpress
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