Sort   by:  
 Page size 
TranscriptomicsRNA-seq of tumor-educated platelets enables blood-based pan-cancer, multiclass and molecular pathway cancer diagnostics
We report RNA-sequencing data of 283 blood platelet samples, including 228 tumor-educated platelet (TEP) samples collected from patients with six different malignant tumors (non-small cell lung cancer, colorectal cancer, pancreatic cancer, glioblastoma, breast cancer and hepatobiliary carcinomas). I...
ORGANISM(S): Homo sapiens 
2015-10-30 | E-GEOD-68086 | biostudies-arrayexpress
TranscriptomicsTwo transcription factors are necessary for iron homeostasis in a salt-dwelling archaeon [ChIP-chip data]
Because iron toxicity and deficiency are equally life threatening, maintaining intracellular iron levels within a narrow optimal range is critical for nearly all known organisms. However, regulatory mechanisms that establish homeostasis are not well understood in organisms that dwell in environments...
ORGANISM(S): Halobacterium sp. NRC-1 
2011-06-02 | E-GEOD-29705 | biostudies-arrayexpress
TranscriptomicsComparative profiling of primary colorectal carcinomas and liver metastases
PURPOSE: We sought to identify genes of clinical significance to predict survival and the risk for colorectal liver metastasis (CLM), the most common site of metastasis from colorectal cancer (CRC). PATIENTS AND METHODS: We profiled gene expression in 31 specimens from primary CRC and 32 unmatched s...
ORGANISM(S): Homo sapiens 
2011-03-22 | E-GEOD-22834 | biostudies-arrayexpress
TranscriptomicsCharacterization of probiotic Escherichia coli isolates using a novel pangenome microarray
Background: Based on 32 Escherichia coli and Shigella genome sequences, we have developed an E. coli pan-genome microarray. Publicly available genomes were annotated in a consistent manor to define all currently known genes potentially present in the species. The chip design was evaluated by hybridi...
ORGANISM(S): Escherichia coli 
2010-05-26 | E-GEOD-8595 | biostudies-arrayexpress
TranscriptomicsGene Expression Circulating B Lymphocytes for Smoking Females
B cells were found to be directly associated with the onset and development of many smoking-induced diseases. However, the in vivo molecular response of B cells underlying the female cigarette smoking remains unknown. Using the genome-wide Affymetrix HG-133A GeneChip® microarray, we compared the gen...
ORGANISM(S): Homo sapiens 
2009-12-25 | E-GEOD-18723 | biostudies-arrayexpress
TranscriptomicsRNA-seq of ChI-D2RKO mouse nucleus accumbens following a progressive ratio schedule of reinforcement of intravenous cocaine or saline
ChI-D2RKO mice showed an altered transcriptomic profile in the dorsomedial striatum in response to contingent cocaine administration. In particular, the expression of critical cocaine-induced transcription factors was not activated in the mutants. This evidence suggests that the altered transcriptio...
ORGANISM(S): Mus musculus 
2025-04-07 | E-MTAB-14303 | biostudies-arrayexpress
GenomicsMeis IBA ChIP-seq
Chromatin immunoprecipitation using pan-Meis antibodies in first branchial arch cells from E11.5 mouse embryos detected by SOLiD sequencing
ORGANISM(S): Mus musculus 
2015-02-02 | E-MTAB-1631 | biostudies-arrayexpress
GenomicsMeis IIBA ChIP-seq
Chromatin immunoprecipitation using pan-Meis antibodies in second branchial arch cells from E11.5 mouse embryos detected by SOLiD sequencing
ORGANISM(S): Mus musculus 
2015-02-02 | E-MTAB-1632 | biostudies-arrayexpress
GenomicsPbx IIBA ChIP-seq
Chromatin immunoprecipitation using pan-Pbx antibodies in second branchial arch cells from E11.5 mouse embryos detected by SOLiD sequencing
ORGANISM(S): Mus musculus 
2015-02-02 | E-MTAB-1633 | biostudies-arrayexpress
TranscriptomicsGene expression Profiling in Follicular Lymphomas
Follicular lymphoma (FL) is an indolent, but incurable subtype of non-Hodgkin lymphoma. These tumor harbor t (14;18) translocation in at least 90% of patients. Recently, activating EZH2 mutations have been Follicular lymphoma (FL) is an indolent, but incurable subtype of non-Hodgkin lymphoma. These ...
ORGANISM(S): Homo sapiens 
2014-07-01 | E-GEOD-55267 | biostudies-arrayexpress
Sort   by:  
 Page size