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MetabolomicsInositol Pyrophosphates Mediate Chloroplast Lipid Remodeling and Nuclear Gene Repression during High-Light Acclimation in Chlamydomonas reinhardtii
Microalgae are photosynthetic organisms capable of autotrophic growth. Their applicability in multiple industrial fields has been largely studied, thanks to their ability to fixate CO2 into high added value organic products like fatty acids and carotenoids. However, our under-standing of the cellula...
2026-06-09 | MTBLS14720 | MetaboLights
ProteomicsArabidopsis chloroplast N-terminome
Protein N-termini are prone to post translational modification and are major determinants of protein stability in bacteria, eukaryotes, and perhaps also in chloroplasts. Most chloroplast proteins undergo N-terminal maturation, but this is poorly understood due to insufficient experimental informatio...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2017-11-14 | MSV000081716 | MassIVE
TranscriptomicsInfluence of non-chloroplast genomes rearangements on chloroplast transcription in cucumber
The experiment was conducted to examine the influence of non-chloroplast genomes rearangements on chloroplast transcription in cucumber
ORGANISM(S): Cucumis sativus 
2011-09-10 | E-MEXP-3233 | biostudies-arrayexpress
TranscriptomicsTomato (Solanum lycopersicum) plants overexpressing cryptochrome 2 reveals modified expression of chloroplast genome
In this study we analyzed the effects of CRY2 over-expression on chloroplast genome transcription of tomato, by developing and using a tiling array. This array containing about 90,000 overlapping probes (5-nt resolution) is a versatile tool for global functional studies of tomato cp genome. We profi...
ORGANISM(S): Lycopersicon esculentum 
2016-06-24 | E-MTAB-1757 | biostudies-arrayexpress
TranscriptomicsThe primary transcriptome of barley (Hordeum vulgare L.) chloroplasts
Gene expression in plastids of higher plants is dependent on two different transcription machineries, a plastid-encoded bacterial-type RNA polymerase (PEP) and a nuclear-encoded phage-type RNA polymerase (NEP), which recognize distinct types of promoters. The division of labor between PEP and NEP du...
ORGANISM(S): Hordeum vulgare 
2011-11-23 | E-GEOD-33773 | biostudies-arrayexpress
ProteomicsDissecting the chloroplast proteome of potato (Solanum tuberosum L.) and its comparison with the tuber amyloplast proteome
Chloroplast, the energy organelle unique to plants and green algae, performs a wide range of functions including photosynthesis and biosynthesis of metabolites. However, as the most important tuber crop worldwide, the potato (Solanum tuberosum) chloroplast proteome has not been explored. Here, we us...
ORGANISM(S): Solanum tuberosum (Potato) 
2022-08-12 | PXD033047 | Pride
Lc-msms Chloroplast Leaf Poatao 
TranscriptomicsChromatin immunoprecipitation of Zea mays chloroplast extracts using antibodies raised against OE17 and OE23 chloroplast targeted proteins
OE17 and OE23 are chloroplast targeted proteins. RNA co-immunoprecipitation was performed using antibodies raised against these proteins. RNA from the pellet and from the supernatent for each pulldown was labeled with different fluoro-dyes.
ORGANISM(S): Zea mays 
2006-09-01 | E-MEXP-784 | biostudies-arrayexpress
ProteomicsMapping of the local proteome of the Arabidopsis chloroplast intermembrane space by proximity labelling
The chloroplast intermembrane space, located between the outer and inner envelope membranes, plays key roles in protein and lipid trafficking. Currently, the proteome of the intermembrane space is largely uncharacterized, with only a relatively few protein players identified, and thus limiting our u...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-07-08 | PXD072271 | Pride
Ims Lc-msms Chloroplast 
ProteomicsThe Eucalyptus grandis chloroplast proteome: leaf development and seasonal variations
Chloroplast is a subcellular compartment in which solar radiation is used to generate simple sugar compounds in a complex process named photosynthesis. It is very sensitive to environmental fluctuations and your development is intimately related with the development of the whole plant at different s...
ORGANISM(S): Eucalyptus grandis 
2022-10-28 | PXD029004 | Pride
Season Leaf development Proteomics Chloroplast Eucalyptus 
TranscriptomicsRNA-seq of Arabidopsis thaliana wild-type and a putative chloroplast ribosome biogenesis mutant AtRsgA homozygous knockout
In this study, we have characterized a putative chloroplast ribosome assembly factor. To elucidate transcriptional responses caused by decreased chloroplast function, we have measured the transcriptome of wild-type and knock-down seedlings.
ORGANISM(S): Arabidopsis thaliana 
2018-08-16 | E-MTAB-6866 | biostudies-arrayexpress
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