Choudhury D D - OmicsDI

OmicsDI

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Unknown (678)
Genomics (24)
Transcriptomics (19)
Proteomics (19)
Metabolomics (2)

Organisms

Homo sapiens (48)
Mus musculus (8)
Arabidopsis thaliana (2)
Severe acute respiratory syndrome coronavirus 2 (2)
Mycobacterium tuberculosis (1)
Saccharomyces cerevisiae (1)
Rattus norvegicus (1)
Bat coronavirus RaTG13 (1)
Drosophila melanogaster (1)

Repository

EGA (22)
biostudies-arrayexpress (21)
pride (17)
MetaboLights (2)
PanoramaPublic (2)

Tissue

Neutrophil (3)
Blood (2)
Blood plasma (2)
Brain (2)
Cell culture (2)
Nasal lavage fluid (2)
Lung (1)
Schwann cell (1)
Skin (1)

Disease

Brain cancer (1)
COVID-19 (1)
Parkinson's disease (1)
Prostate cancer (1)

Technology Type

Mass Spectrometry (17)
Shotgun proteomics (9)
Bottom-up proteomics (4)
Data-independent acquisition (4)
Mass spectrometry (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Illumina HiSeq 2000 (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (2)
Illumina NovaSeq 6000 (1)

Publication Date

2025 (6)
2022 (5)
2012 (4)
2010 (4)
2021 (4)
2023 (3)
2011 (3)
2015 (2)
2013 (2)
2008 (2)
2017 (1)
2014 (1)
2009 (1)
2026 (1)
2024 (1)

CHEBI ID

CHEBI:10106 (2)
CHEBI:10135 (2)
CHEBI:102216 (2)
CHEBI:111173 (2)
CHEBI:116314 (2)
CHEBI:1217 (2)
CHEBI:134485 (2)
CHEBI:134750 (2)
CHEBI:134758 (2)
CHEBI:134827 (2)
CHEBI:134834 (2)
CHEBI:134894 (2)
CHEBI:134934 (2)
CHEBI:135291 (2)
CHEBI:135566 (2)
CHEBI:135932 (2)
CHEBI:137055 (2)
CHEBI:137125 (2)
CHEBI:137268 (2)
CHEBI:1391 (2)
CHEBI:142245 (2)
CHEBI:142683 (2)
CHEBI:143054 (2)
CHEBI:143870 (2)
CHEBI:1458 (2)
CHEBI:156235 (2)
CHEBI:15746 (2)
CHEBI:15756 (2)
CHEBI:1582 (2)
CHEBI:15843 (2)

Metabolite Name

(-)-Octanoylcarnitine (2)
(-)-Rhododendrin (2)
(-)-THREO-SPHINGOSINE (2)
(2E)-2-Tridecene-4,6,8-triyn-1-ol (2)
(2E,4E,12Z)-N-Isobutyl-2,4,12-octadecatrienamide (2)
(2R,3R,4S,5S,6R)-2-[(3Z)-hex-3-en-1-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol (2)
(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-(2-phenylethoxy)oxane-3,4,5-triol (2)
(2R,3S,4S,5S,6R)-2-({7-hydroxy-4-[(3Z)-5-hydroxy-3-methylpent-3-en-1-yl]-4a,8,8-trimethyl-3-methylidene-decahydronaphthalen-2-yl}oxy)-6-(hydroxymethyl)oxane-3,4,5-triol (2)
(2S)-2-Amino-8-hydroxyoctanoic acid (2)
(3S)-3-Amino-2-azepanone (2)
(4E)-1,7-Bis(4-hydroxyphenyl)-4-hepten-3-one (2)
(9E,12E)-9,12-Octadecadienoic acid (2)
(9Z)-9-Octadecenamide (2)
(E)-Dacarbazine (2)
(E)-p-coumaric acid (2)
(Z)-3-butylidene-7-hydroxyphthalide (2)
(Z)-Hex-3-enyl benzoate (2)
1,2-Cyclohexadione (2)
1,3,7-Octanetriol (2)
1,4-Anhydro-6-O-dodecanoyl-2,3-bis-O-(2-hydroxyethyl)-D-glucitol (2)
1-(4-methylphenyl)-3,5-diphenylpent-2-ene-1,5-dione (2)
1-Allyl-2,3,4,5-tetramethoxybenzene (2)
1-Heptanethiol (2)
1-Hexadecanoyl-sn-glycero-3-phosphocholine (2)
1-Hexyl-2-methylbenzene (2)
1-Linoleoyl-sn-glycero-3-phosphocholine (2)
1-Monopalmitoylglycerol (2)
1-Oleoyl-rac-glycerol (2)
1-Tetradecylamine (2)
1-[2,6-Dimethyl-4-(2-methyl-2-propanyl)-3,5-dinitrophenyl]ethanone (2)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (5)
Unknown experiment type (1)
ChIP-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (93)
2023 (85)
2022 (84)
2021 (83)
2024 (70)
2020 (51)
2018 (30)
2019 (28)
2017 (26)
2015 (25)
2016 (22)
2011 (16)
2014 (14)
2012 (13)
2010 (13)
2013 (11)
2026 (11)
2009 (7)
2008 (5)
2006 (4)
2007 (3)
2005 (3)
2004 (1)
2003 (1)

Lab affiliation

Proteomics Lab, 304, BSBE Department, Indian Institute Technology Bombay, Powai, Mumbai, India-400076 (3)
Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh, Edinburgh, UK. (2)
Center for Translational Research and Molecular Biology of Cancer, Maria Sklodowska-Curie National Research Institute of Oncology Gliwice Branch, Gliwice, Poland (1)
Department of Pathology and Medicine, University of California at San Diego, La Jolla, CA 92093, USA (1)
Division of Host-Microbe Systems & Therapeutics, Department of Pediatrics, UC San Diego School of Medicine, La Jolla, CA, USA. (1)
International Institute of Molecular and Cell biology, Warsaw, Poland (1)
J. Craig Venter Institute 4120 Capricorn Lane La Jolla, CA 92037 (1)
Ludwig-Maximilians-University of Munich Biomedical Center - Molecular Biology Großhaderner Strasse 9 82152 Planegg-Martinsried Germany (1)
Personal Chair of Cancer Network Biology, Centre for Cancer Research, Institute of Genetics and Cancer, The University of Edinburgh (1)
Quantitative Biosciences Institute (QBI), University of California, San Francisco, San Francisco, CA USA J. David Gladstone Institutes, San Francisco, San Francisco, CA, USA Department of Bionengineer and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA (1)
Scancell Unit 202 Bellhouse Building Sanders Road Oxford Science Park Oxford OX4 4GD UK (1)
School of Medical Sciences, Faculty of Medicine and Health, The University of Sydney, NSW 2006, Australia (1)
UCSF (1)
University of California, San Francisco (1)