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GenomicsChromatin accessibility of hematopoietic stem/progenitor cells (HSPCs) derived from MDS patients before and after disease progression
Myelodisplastic syndromes are a oligoclonal disease starting at the level of the stem/progenitor compartment. We used ATACseq to determine changes in chromating landscape between MDS low and high risk samples.
ORGANISM(S): Homo sapiens 
2025-06-02 | GSE298729 | GEO
GenomicsGene expression profile at the single cell level of hematopoietic stem/progenitor cells (HSPCs) derived from iPSC at day 12 of differentiation; and from erythroid cultures derived from HS/PC-iPSC at day 4 (ATAC-Seq)
Myelodisplastic syndromes are a oligoclonal disease starting at the level of the stem/progenitor compartment. We use ATACseq to determine changes in chromating landscape between MDS low and high risk samples.
ORGANISM(S): Homo sapiens 
2025-05-02 | GSE236707 | GEO
GenomicsGenome-wide sequences bound by the transcription factors BLUEJAY and JACKDAW in Arabidopsis thaliana roots
We report the genomic sequences bound by the C2H2 transcription factors BLUEJAY and JACKDAW as profiled by chromating immunoprecipitation experiments followed by Illumina high sequencing. Plants were carrying constructs of proteins (translational) fusions of these transcription factors to the yellow...
ORGANISM(S): Arabidopsis thaliana 
2015-11-02 | GSE60011 | GEO
GenomicsGenome-wide sequences bound by the transcription factors BLUEJAY and JACKDAW in Arabidopsis thaliana roots
We report the genomic sequences bound by the C2H2 transcription factors BLUEJAY and JACKDAW as profiled by chromating immunoprecipitation experiments followed by Illumina high sequencing. Plants were carrying constructs of proteins (translational) fusions of these transcription factors to the yellow...
ORGANISM(S): Arabidopsis thaliana 
2015-11-02 | E-GEOD-60011 | biostudies-arrayexpress
GenomicsChromatin accessibility of hematopoietic stem/progenitor cells (HSPCs) derived from MDS patients before and after disease progression
Chromatin accessibility of hematopoietic stem/progenitor cells (HSPCs) derived from MDS patients before and after disease progression
PRJNA1271021 | ENA
GenomicsGemone-wide maps of PRC2 complex components and chromatin states in prostate cancer cell lines
We report the high-throughput profiling of PRC2 core subunits chromatin states and histone modifications in two prostate cancer cell lines, androgen-dependent cells LNCaP and androgen-independent cells LNCaP-abl (abl). By obtaining over 1 billion bases of sequence from chromatin immunoprecipitated D...
ORGANISM(S): Homo sapiens 
2012-11-30 | E-GEOD-39459 | biostudies-arrayexpress
GenomicsGenome-wide maps of PRC2 complex components and chromatin states in prostate cancer cell lines
We report the high-throughput profiling of PRC2 core subunits chromatin states and histone modifications in two prostate cancer cell lines, androgen-dependent cells LNCaP and androgen-independent cells LNCaP-abl (abl). By obtaining over 1 billion bases of sequence from chromatin immunoprecipitated D...
ORGANISM(S): Homo sapiens 
2012-11-30 | GSE39459 | GEO
UnknownTranscriptomic analyses in the gametophytes of the apomictic fern Dryopteris affinis.
Not available
S-EPMC11447071 | biostudies-literature
GenomicsGene expression profile at the single cell level of hematopoietic stem/progenitor cells (HSPCs) derived from iPSC at day 12 of differentiation and from erythroid cultures derived from HS/PC-iPSC at day 4 (ATAC-Seq)
Gene expression profile at the single cell level of hematopoietic stem/progenitor cells (HSPCs) derived from iPSC at day 12 of differentiation and from erythroid cultures derived from HS/PC-iPSC at day 4 (ATAC-Seq)
PRJNA992214 | ENA
ProteomicsReduced polymerase pausing compensates for increased chromatin accessibility in the aging liver
Regulation of gene expression is linked to the organization of the genome. With age, chromatin alterations occur on all levels of genome organization, accompanied by changes in the gene expression profile. However, little is known about the changes on the level of transcriptional regulation. Here, w...
ORGANISM(S): Mus musculus (Mouse) 
2022-09-15 | PXD034564 | Pride
Tmt Chromating Polymerase Liver Aging 
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