Chu K K - OmicsDI

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Unknown (7782)
Proteomics (97)
Transcriptomics (90)
Genomics (55)
Metabolomics (23)

Organisms

Homo sapiens (125)
Mus musculus (44)
Rattus norvegicus (5)
Schizosaccharomyces pombe (4)
Saccharomyces cerevisiae (3)
Gallus gallus (3)
Arabidopsis thaliana (3)
Fasciola hepatica (3)
Helicobacter pylori 26695 (2)
Macaca fascicularis fascicularis (2)
Gastrodia elata (1)
Plutella xylostella (1)
Beauveria bassiana ARSEF 2860 (1)
Drosophila (1)
Staphylococcus aureus subsp. aureus NCTC 8325 (1)
Mustela putorius furo (1)
Yersinia pestis (1)
Listeria monocytogenes (1)
Glycine max (1)
Caenorhabditis elegans (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Danio rerio (1)
Glaesserella parasuis (1)
Enterococcus faecalis V583 (1)
Escherichia coli K-12 (1)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (1)
Streptococcus agalactiae 2603V/R (1)
Angiostrongylus cantonensis (1)
Architeuthis dux (1)
Arvicola (1)

Organisms

Balaenoptera musculus (3)
Klebsiella pneumoniae (3)
Homo sapiens (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (96)
pride (72)
EGA (38)
MetaboLights (19)
iProX (11)
ENA (11)
MassIVE (10)
GNPS (4)
jPOST (3)
PanoramaPublic (1)

Tissue

Cell culture (13)
Liver (6)
Epithelial cell (5)
Brain (3)
Kidney (3)
Blood plasma (2)
Blood serum (2)
Cerebrospinal fluid (2)
Embryonic stem cell (2)
Lung (2)
Macrophage (2)
Plant cell (2)
Root (2)
Tear (2)
B cell (1)
Blood (1)
Bone marrow (1)
Cerebrospinal fluid secreting cell (1)
Colon (1)
Dendritic cell (1)
Duodenum (1)
Duodenum glandular cell (1)
Fibroblast (1)
Glioblastoma cell (1)
Heart (1)
Mantle (1)
Mycelium (1)
Myeloid lineage restricted progenitor cell (1)
Neuron (1)
Neuron of the dorsal spinal cord (1)

Disease

Disease free (4)
Lymphoma (2)
Acute myeloid leukemia (2)
Glioblastoma (2)
Anaplastic large cell lymphoma has DiseaseStaging II (1)
"hepatocellular adenoma" (1)
Glioblastoma multiforme (1)
Prostate carcinoma (1)
Acute leukemia (1)
B-cell lymphoma (1)
Bacterial exanthem (1)
Breast cancer (1)
Cardiovascular system disease (1)
Cerebrovascular disease (1)
Cervix carcinoma (1)
Colon cancer (1)
Hydrocephalus (1)
IgA glomerulonephritis (1)
Insulin dependent type diabetes mellitus uncontrolled with ketoacidosis (1)
Male infertility (1)
Malignant neoplasm of ovary (1)
Plasmodium falciparum malaria (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (72)
Shotgun proteomics (35)
Mass spectrometry (16)
Bottom-up proteomics (13)
Affinity purification coupled with mass spectrometry proteomics (9)
Data-dependent acquisition (8)
Gel-based experiment (7)
Data-independent acquisition (4)
Top-down proteomics (4)
SWATH MS (3)
All-ion fragmentation (2)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
NMR spectroscopy assay (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
Proteogenomics (1)
SRM/MRM (1)

Instrument Platform

Q Exactive (5)
Liquid Chromatography MS - positive - reverse phase (4)
Orbitrap Exploris 480 (3)
Liquid Chromatography MS - negative - reverse phase (3)
Illumina HiSeq 2500 (2)
Q Exactive Plus (2)
Orbitrap Eclipse (2)
Orbitrap Fusion ETD (2)
Exactive (Thermo Scientific) (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Scanning hardware (1)
MinION (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
Agilent 7890A GC with 5975C inert XL MSD (1)
Bruker Daltonics instrument model (1)
TSQ Quantum Ultra (1)
Varian NMR (1)
Q Exactive HF-X (1)
TimsTOF Pro (1)
6540 Q-TOF LC/MS (Agilent) (1)
Flow injection analysis MS - (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative – rp (1)

Publication Date

2025 (21)
2024 (18)
2022 (17)
2015 (16)
2023 (12)
2012 (11)
2011 (11)
2010 (11)
2026 (11)
2014 (10)
2020 (9)
2013 (9)
2007 (9)
2021 (9)
2019 (9)
2016 (8)
2018 (8)
2008 (5)
2006 (4)
2017 (4)
2005 (1)
2004 (1)

CHEBI ID

CHEBI:15428 (6)
CHEBI:16704 (6)
CHEBI:6650 (6)
CHEBI:15741 (5)
CHEBI:16708 (5)
CHEBI:16737 (5)
CHEBI:17596 (5)
CHEBI:18012 (5)
CHEBI:32816 (5)
CHEBI:15351 (4)
CHEBI:15891 (4)
CHEBI:16027 (4)
CHEBI:16235 (4)
CHEBI:16335 (4)
CHEBI:16449 (4)
CHEBI:16811 (4)
CHEBI:17050 (4)
CHEBI:17084 (4)
CHEBI:22660 (4)
CHEBI:24898 (4)
CHEBI:30769 (4)
CHEBI:30887 (4)
CHEBI:30915 (4)
CHEBI:15318 (3)
CHEBI:15354 (3)
CHEBI:15356 (3)
CHEBI:15603 (3)
CHEBI:15676 (3)
CHEBI:15698 (3)
CHEBI:15843 (3)

Metabolite Name

Adenine (4)
Alanine (4)
Cysteine (4)
Fructose (4)
Glycine (4)
Methionine (4)
Proline (4)
Serine (4)
2'-deoxycytidine (3)
2'-deoxyguanosine (3)
3-phosphoglycerate (3)
5-oxoproline (3)
Adenosine (3)
Arginine (3)
Choline (3)
Citric acid (3)
Citrulline (3)
Creatinine (3)
Creatinine (3)
Cytidine (3)
Fumaric acid (3)
Glutamine (3)
Glycerol (3)
Glycine (3)
Guanine (3)
Guanosine (3)
Inosine (3)
Inosine (3)
Uridine (3)
Xanthine (3)

First Public Date

2026 (3)
2019 (3)
2024 (1)
2022 (1)
2021 (1)
2020 (1)
2018 (1)

Classification

bacteria (3)

Study type

Transcription profiling by array (60)
RNA-seq of coding RNA (14)
ChIP-seq (6)
Methylation profiling by array (4)
Comparative genomic hybridization by array (3)
Unknown experiment type (2)
ChIP-chip by array (2)
ChIP-chip by tiling array (1)
Genotyping by array (1)
MicroRNA profiling by array (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (987)
2025 (983)
2023 (909)
2021 (890)
2024 (871)
2020 (645)
2019 (503)
2018 (392)
2017 (310)
2016 (279)
2015 (245)
2014 (192)
2026 (140)
2012 (106)
2013 (105)
2011 (86)
2010 (67)
2009 (49)
2007 (39)
2008 (29)
2006 (17)
2004 (9)
2005 (8)
2003 (4)
2002 (4)
2000 (4)
2001 (3)
1999 (1)
1998 (1)

Lab affiliation

Univ. Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, F-59000 Lille, France (3)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada. (2)
Head of Lab of Cancer Signaling GIGA-institute Université de Liège CHU, B34, Tour GIGA (+2) B-4000 Liège (2)
Universität Hohenheim (260b) Systembiologie der Pflanze Garbenstraße 30, Bio1 U2 70599 Stuttgart (2)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
1Seer, Inc., Redwood City, CA 94065, USA; 4Center for Nanomedicine and Department of Anesthesiology, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA 02115, USA (1)
Assisstant professor. Graduate College. Rush University Medical Center. (1)
Associate Professor, The Swire Institute of Marine Sciences and School of Biological Sciences, The University of Hong Kong, Hong Kong (1)
Babraham Institute (1)
Bioinformatics, TruDiagnostic, USA (1)
CEDOC, NMS, Lisbon, Portugal (1)
CHU Angers, Angers, France Inserm UMR 1307, CNRS UMR 6075, Université de Nantes, CRCI2NA, Université d'Angers, Angers, France (1)
CNRS, INSERM, CHU Lille, Institut Pasteur de Lille, U1019, UMR 8204, CIIL – Centre d’Infection et d’Immunité de Lille, Univ. Lille, 59000 Lille, France (1)
Center for Macroecology, Evolution and Climate, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark. The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark. (1)
Centre d'Infection et d'Immunité de Lille Univ. Lille (CIIL), Univ. Lille, CNRS UMR 8204, Inserm U1019, CHU Lille, Institut Pasteur de Lille, F-59000 Lille, France. (1)
Centre de Recherche du CHU Ste-Justine (1)
Centre de Recherche sur le Cancer de l‘Université Laval,Oncology, Centre de Recherche du CHU de Québec-Université Laval, Canada, G1R 3S3 (1)
Centre de Recherche sur le Cancer, PROTEO et Département de Biologie Moléculaire, Biochimie Médicale et Pathologie, Université Laval, Division Oncologie, Centre de Recherche du Centre Hospitalier Universitaire (CHU) de Québec, Québec, Canada (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Bavaria, Germany (1)
College of Life Sciences, Zhejiang University, China (1)
Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22903 (1)
Department of Chemistry, the University of Hong Kong (1)
Department of General Surgery, Key Laboratory of Hepatosplenic Surgery, Ministry of Education, The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Department of Hepatobiliary Surgery, Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. (1)
Department of Medical Biotechnology and Laboratory Science, College of Medicine, Chang Gung University, Taiwan (1)
Department of Medical Biotechnology and Laboratory Sciences, College of Medicine, Chang Gung University, Taiwan (1)
Department of Molecular, Cellular, & Biomedical Sciences, Chu Lab, University of New Hampshire, United States (1)
Department of Neurosurgery and Institute for NeurosciencesUniversity Hospital of Toulouse, Toulouse, France. Toulouse NeuroImaging Center (ToNIC), University of Toulouse, INSERM, UPS, Toulouse, France. (1)
Department of Obstetrics and Gynecology, Inova Fairfax Medical Campus, Inova Health System (1)
Department of Pathology, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan. (1)

8047 Results

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